RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 DHDDSQ86SQ9 333 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 SYTL1Q8IYJ3 562 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 UNC5BQ8IZJ1 945 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 CASP10Q92851 521 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 NXNL1Q96CM4 212 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 MED8Q96G25 268 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 CDK5RAP1Q96SZ6 601 aaKnown RBP14.55□□□□□ -0.08
SCARB2-216ENST00000639300 MLPHQ9BV36 600 aaPredicted RBP14.55□□□□□ -0.08
SCARB2-216ENST00000639300 ROGDIQ9GZN7 287 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 SLC17A6Q9P2U8 582 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 PCDHB9Q9Y5E1 797 aa14.55□□□□□ -0.08
SCARB2-216ENST00000639300 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 PLIN3O60664 434 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ABCB1P08183 1280 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 HOXB8P17481 243 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 HDCP19113 662 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ZBTB17Q13105 803 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 KLF10Q13118 480 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 NEDD8Q15843 81 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 SOWAHAQ2M3V2 549 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ARL13AQ5H913 290 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 LPCAT2Q7L5N7 544 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 HPS6Q86YV9 775 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ZC3H3Q8IXZ2 948 aaKnown RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 BDH2Q9BUT1 245 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ARL15Q9NXU5 204 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 TELO2Q9Y4R8 837 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 TMEM114B3SHH9 223 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 CCT8P50990 548 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 FAM98BQ52LJ0 330 aaKnown RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 FBXO48Q5FWF7 155 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 BANPQ8N9N5 519 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 OTUB1Q96FW1 271 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 NPAS2Q99743 824 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 EMILIN2Q9BXX0 1053 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 GRIP2Q9C0E4 1043 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 CDH19Q9H159 772 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 TRIM45Q9H8W5 580 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 NMRK1Q9NWW6 199 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 PTGES3LE9PB15 166 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ELNP15502 786 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 RAP1GDS1P52306 607 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 RAD23AP54725 363 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 MAP3K10Q02779 954 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 PEX6Q13608 980 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 SYPL2Q5VXT5 272 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 DDX1Q92499 740 aaKnown RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 SNX27Q96L92 541 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 CAMKK2Q96RR4 588 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 MTIF3Q9H2K0 278 aaKnown RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 RERGLQ9H628 205 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 FAM53CQ9NYF3 392 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 OPTCQ9UBM4 332 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 MYH11P35749 1972 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 TK2O00142 265 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 HCRTO43612 131 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 TNFAIP8O95379 198 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ATP6V1C1P21283 382 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 NEK3P51956 506 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 MPP1Q00013 466 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 SWT1Q5T5J6 900 aaKnown RBP14.54□□□□□ -0.08
SCARB2-216ENST00000639300 NAT8LQ8N9F0 302 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 OR6K2Q8NGY2 324 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 SLC4A5Q9BY07 1137 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ZNF358Q9NW07 568 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 COMMD8Q9NX08 183 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 ZNHIT2Q9UHR6 403 aa14.54□□□□□ -0.08
SCARB2-216ENST00000639300 GCATO75600 419 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 AP2A1O95782 977 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 APOA1P02647 267 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 FCGR1AP12314 374 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 ALOX15P16050 662 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 CTPS1P17812 591 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 TRPC1P48995 793 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 GRIK3Q13003 919 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 BRMS1LQ5PSV4 323 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 FSTL4Q6MZW2 842 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 ESRP1Q6NXG1 681 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 AGAP2Q99490 1192 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 C1orf50Q9BV19 199 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 EGFL7Q9UHF1 273 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 DNMT3LQ9UJW3 386 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 CLCA2Q9UQC9 943 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.084e-6■■■■■ 139.6
SCARB2-216ENST00000639300 A0A0G2JLL6 359 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 H0YGN5 161 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 OR1D2P34982 312 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 GPC1P35052 558 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 SMAD3P84022 425 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 IL5RAQ01344 420 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 CAMK2GQ13555 558 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 ADRM1Q16186 407 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 KHDC1Q4VXA5 237 aaKnown RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 FAM45BPQ6NSW5 357 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 RHBDF2Q6PJF5 856 aa14.53□□□□□ -0.08
SCARB2-216ENST00000639300 PRRT2Q7Z6L0 340 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-216ENST00000639300 APLFQ8IW19 511 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms