RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CROTQ9UKG9 612 aa15.74■□□□□ 0.11
CACNA1A-235ENST00000637004 RUVBL2Q9Y230 463 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-235ENST00000637004 MFHAS1Q9Y4C4 1052 aa15.74■□□□□ 0.11
CACNA1A-235ENST00000637004 SNX9Q9Y5X1 595 aa15.74■□□□□ 0.11
CACNA1A-235ENST00000637004 SAC3D1A6NKF1 404 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 GAS2O43903 313 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 MFSD11O43934 449 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 SRP72O76094 671 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 SNRPB2P08579 225 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 ICAM3P32942 547 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 GLRBP48167 497 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 KCNC4Q03721 635 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 SLC12A1Q13621 1099 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 AGKQ53H12 422 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 DCAF6Q58WW2 860 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 FAM45BPQ6NSW5 357 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 ABRAXAS1Q6UWZ7 409 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 HACD2Q6Y1H2 254 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 PID1Q7Z2X4 250 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 SULF1Q8IWU6 871 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 FSTL5Q8N475 847 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 FAM45AQ8TCE6 357 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 CANT1Q8WVQ1 401 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 C9orf16Q9BUW7 83 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 C1orf50Q9BV19 199 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 TRIM15Q9C019 465 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 ADAMTS10Q9H324 1103 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 TMEM181Q9P2C4 612 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 B3GNT3Q9Y2A9 372 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 USP3Q9Y6I4 520 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 PTPRFP10586 1907 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 LACTBL1A8MY62 500 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 MRASO14807 208 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 SULT1C4O75897 302 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 GJA8P48165 433 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 BNIP3Q12983 259 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 USP10Q14694 798 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 STXBP2Q15833 593 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 SLC36A3Q495N2 470 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 JADE1Q6IE81 842 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 ANKRD26P1Q6NSI1 321 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 PIWIL4Q7Z3Z4 852 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 PSTKQ8IV42 348 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 PPP1R10Q96QC0 940 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 TUBA1CQ9BQE3 449 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 C11orf84Q9BUA3 381 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 TDRD1Q9BXT4 1180 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 MAGEB5Q9BZ81 275 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 CDT1Q9H211 546 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 CCM2LQ9NUG4 571 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 TRNAU1APQ9NX07 287 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 TRIM17Q9Y577 477 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 DOCK5Q9H7D0 1870 aa15.73■□□□□ 0.11
CACNA1A-235ENST00000637004 RNF103-CHMP3A0A140T963 221 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 TMX2-CTNND1H3BSU7 103 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 DLX3O60479 287 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 SEC24DO94855 1032 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 AP2A1O95782 977 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 GRIA3P42263 894 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 CSRP3P50461 194 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 ATXN1P54253 815 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 OAZ1P54368 228 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 MPP1Q00013 466 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 SEPT6Q14141 434 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 GRM3Q14832 879 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 NR1D2Q14995 579 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 EEF1DP3Q658K8 133 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 TMEM53Q6P2H8 277 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 TMEM26Q6ZUK4 368 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 EEPD1Q7L9B9 569 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 ERO1BQ86YB8 467 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 C12orf29Q8N999 325 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 SEPT8Q92599 483 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 WNK4Q96J92 1243 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 ARPC5LQ9BPX5 153 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 MCMBPQ9BTE3 642 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 IARS2Q9NSE4 1012 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 SEPT3Q9UH03 358 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 CFAP99D6REC4 459 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 UBDO15205 165 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 F7P08709 466 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 IL10P22301 178 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 INPP5AQ14642 412 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 USP50Q70EL3 339 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 TMEM192Q8IY95 271 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 CPNE9Q8IYJ1 553 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 CCDC185Q8N715 623 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 ACVR1CQ8NER5 493 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 ZUFSPQ96AP4 578 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 MFSD3Q96ES6 412 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 ZBED3Q96IU2 234 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 FAM167AQ96KS9 214 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 PCYT2Q99447 389 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 YTHDF1Q9BYJ9 559 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 RHOJQ9H4E5 214 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 FAM49BQ9NUQ9 324 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 CCDC167Q9P0B6 97 aa15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 KLHL8Q9P2G9 620 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-235ENST00000637004 TMEM233B4DJY2 109 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms