RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 DNAJC21Q5F1R6 531 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 TTC39BQ5VTQ0 682 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CAPN12Q6ZSI9 719 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 PGBD5Q8N414 524 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 TEX26Q8N6G2 289 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 ATP11CQ8NB49 1132 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 SPATA22Q8NHS9 363 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CSGALNACT1Q8TDX6 532 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 ARHGEF2Q92974 986 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 TLCD1Q96CP7 247 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CCDC77Q9BR77 488 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 ROPN1BQ9BZX4 212 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CENPHQ9H3R5 247 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 VPS37BQ9H9H4 285 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 ROPN1Q9HAT0 212 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 SP110Q9HB58 689 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 VPS18Q9P253 973 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 ACTL7AQ9Y615 435 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 WDR87Q6ZQQ6 2873 aa9.65□□□□□ -0.87
PDLIM5-223ENST00000627587 A0A1B0GVM2 712 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GOLGA6CA6NDK9 693 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TCAF2A6NFQ2 919 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ERI2A8K979 691 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 FOXO6A8MYZ6 492 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 USP12O75317 370 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 MT-CYBP00156 380 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 IVLP07476 585 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 RETP07949 1114 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GOLGA6DP0CG33 693 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 MLNP12872 115 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TDGF1P13385 188 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 FCARP24071 287 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 DDX6P26196 483 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GDI1P31150 447 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PHBP35232 272 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CXCL12P48061 93 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 IFNAR2P48551 515 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CRADDP78560 199 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 HNRNPDQ14103 355 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PRPSAP1Q14558 356 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 STAT4Q14765 748 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 EFTUD2Q15029 972 aaKnown RBP eCLIP9.64□□□□□ -0.875e-8■□□□□ 11.1
PDLIM5-223ENST00000627587 TEAD2Q15562 447 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ARHGAP15Q53QZ3 475 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 FSCBQ5H9T9 825 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 C6orf118Q5T5N4 469 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 LRRC8BQ6P9F7 803 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CHST9Q7L1S5 443 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PALM2Q8IXS6 379 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 YAF2Q8IY57 180 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CYP4X1Q8N118 509 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 OR7D4Q8NG98 312 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 WFDC5Q8TCV5 224 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 NSMCE1Q8WV22 266 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 LRRC39Q96DD0 335 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PGM2Q96G03 612 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GLOD4Q9HC38 313 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GOLGA6AQ9NYA3 693 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 UBP1Q9NZI7 540 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 NDRG2Q9UN36 371 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TBC1D30Q9Y2I9 924 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 SH3BP1Q9Y3L3 701 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TTLL3Q9Y4R7 772 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 DMDP11532 3685 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 KIF26AQ9ULI4 1882 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TCRBV9S1A1TA0A576 114 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TLDC2A0PJX2 215 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 SMIM23A6NLE4 172 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 HMGB1P1B2RPK0 211 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 RASGRF2O14827 1237 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 MUSKO15146 869 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PRAMEF11O60813 436 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GJB3O75712 270 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PRAMEF12O95522 483 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 MMP2P08253 660 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TSHRP16473 764 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GLDCP23378 1020 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 RENBPP51606 427 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GNA12Q03113 381 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 IL10RBQ08334 325 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF177Q13360 481 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 DGKKQ5KSL6 1271 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 GPR158Q5T848 1215 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 AGBL2Q5U5Z8 902 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 RNF43Q68DV7 783 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 VITQ6UXI7 678 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 C3orf62Q6ZUJ4 267 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PRPF39Q86UA1 669 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CMTM8Q8IZV2 173 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 SPEM1Q8N4L4 309 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 TTC16Q8NEE8 873 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 OR52K1Q8NGK4 314 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms