RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SAMD4BQ5PRF9 694 aaKnown RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 CERCAMQ5T4B2 595 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 TSTD2Q5T7W7 516 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 ANKRD26P1Q6NSI1 321 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 PSTKQ8IV42 348 aaKnown RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 TP53INP2Q8IXH6 220 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 OR2T34Q8NGX1 318 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 OR2T3Q8NH03 318 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 SPPL2BQ8TCT7 592 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 MUC3BQ9H195 1237 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 MINDY3Q9H8M7 445 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 POLR1BQ9H9Y6 1135 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 MYOZ2Q9NPC6 264 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 CASS4Q9NQ75 786 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 CHRAC1Q9NRG0 131 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 CCDC167Q9P0B6 97 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 KLHL8Q9P2G9 620 aaPredicted RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 TNFSF13BQ9Y275 285 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 FIS1Q9Y3D6 152 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 J3QRK9 145 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 MRASO14807 208 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 SRP72O76094 671 aaKnown RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 HOXD12P35452 270 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 SLC12A1Q13621 1099 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 INTS11Q5TA45 600 aaKnown RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 NIPAL1Q6NVV3 410 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 CNSTQ6PJW8 725 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 ZC3HC1Q86WB0 502 aaKnown RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 FAM131BQ86XD5 332 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 ZDHHC17Q8IUH5 632 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 SNX31Q8N9S9 440 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 FBXL8Q96CD0 374 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 OMDQ99983 421 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 TRNAU1APQ9NX07 287 aaKnown RBP14.26□□□□□ -0.13
LDB3-209ENST00000623056 GNPTGQ9UJJ9 305 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 CROTQ9UKG9 612 aa14.26□□□□□ -0.13
LDB3-209ENST00000623056 FAM149AA5PLN7 773 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 ZBTB42B2RXF5 422 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 NRP1O14786 923 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 NPHS1O60500 1241 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SULT1C4O75897 302 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 CLIC3O95833 236 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SNRPB2P08579 225 aaKnown RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 CDH3P22223 829 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SLC7A2P52569 658 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 OAZ1P54368 228 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 KCNC4Q03721 635 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 GALNT2Q10471 571 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 ZBTB17Q13105 803 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 EML3Q32P44 896 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SLC36A3Q495N2 470 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 PITRM1Q5JRX3 1037 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 TBCELQ5QJ74 424 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 EEPD1Q7L9B9 569 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SLC26A9Q7LBE3 791 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SLC41A1Q8IVJ1 513 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 FBXL20Q96IG2 436 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SLC39A3Q9BRY0 314 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 UNKQ9C0B0 810 aaKnown RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 TMPRSS4Q9NRS4 437 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 CCM2LQ9NUG4 571 aaPredicted RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 FZD10Q9ULW2 581 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 LCTP09848 1927 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 HTR3EA5X5Y0 456 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 UBDO15205 165 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 IQCF3P0C7M6 154 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 MBTD1Q05BQ5 628 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 ZNF460Q14592 562 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 PPP1R3AQ16821 1122 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 FAM45BPQ6NSW5 357 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 C8orf82Q6P1X6 216 aaPredicted RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 SIX6OS1Q8N1H7 587 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 SPATA6LQ8N4H0 392 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 FAM45AQ8TCE6 357 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 APOL2Q9BQE5 337 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 CORO1BQ9BR76 489 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 MRPL45Q9BRJ2 306 aaKnown RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 OSBPL2Q9H1P3 480 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 RHOJQ9H4E5 214 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 LRRC4Q9HBW1 653 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 PALMDQ9NP74 551 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 HACD3Q9P035 362 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 RCOR3Q9P2K3 495 aaPredicted RBP14.25□□□□□ -0.13
LDB3-209ENST00000623056 AURKCQ9UQB9 309 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 FADS3Q9Y5Q0 445 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 CORINQ9Y5Q5 1042 aa14.25□□□□□ -0.13
LDB3-209ENST00000623056 ZNF638Q14966 1978 aaKnown RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 RLFQ13129 1914 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 IGKV6-21A0A0C4DH24 114 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SNAP91O60641 907 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 HNRNPLP14866 589 aaKnown RBP eCLIP14.24□□□□□ -0.13
LDB3-209ENST00000623056 TPH1P17752 444 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 LRPAP1P30533 357 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SNX16P57768 344 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NR1D2Q14995 579 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 TMEM132DQ14C87 1099 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms