RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 DDX18Q9NVP1 670 aaKnown RBP5.72□□□□□ -1.49
EBF1-211ENST00000622875 EXTL2Q9UBQ6 330 aa5.72□□□□□ -1.49
EBF1-211ENST00000622875 TDRKHQ9Y2W6 561 aaKnown RBP5.72□□□□□ -1.49
EBF1-211ENST00000622875 THADAQ6YHU6 1953 aa5.72□□□□□ -1.49
EBF1-211ENST00000622875 hCG_1642624A0A1W2PR95 340 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 SH3PXD2BA1X283 911 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 PFKFB2O60825 505 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 BMP10O95393 424 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 TGM6O95932 706 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.49
EBF1-211ENST00000622875 MARK3P27448 753 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 LIFRP42702 1097 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 PPP3CCP48454 512 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 TMPRSS3P57727 454 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 RTP5Q14D33 572 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 EDRF1Q3B7T1 1238 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 MICU3Q86XE3 530 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 COLGALT2Q8IYK4 626 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 NEDD1Q8NHV4 660 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 TBC1D15Q8TC07 691 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 SHC3Q92529 594 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 ELSPBP1Q96BH3 223 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 WDR12Q9GZL7 423 aaKnown RBP5.71□□□□□ -1.49
EBF1-211ENST00000622875 ATP13A3Q9H7F0 1226 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 CDHR5Q9HBB8 845 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 SDHAF3Q9NRP4 125 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 SETD4Q9NVD3 440 aa5.71□□□□□ -1.49
EBF1-211ENST00000622875 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 GRID2IPA4D2P6 1211 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 H3BNX3 289 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 KRIT1O00522 736 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 GJB3O75712 270 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 TNFAIP8O95379 198 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 HLA-EP13747 358 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 ATP5F1P24539 256 aaPredicted RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 CTHP32929 405 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 POLD2P49005 469 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 AFF1P51825 1210 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 NR1H2P55055 460 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SNAP25P60880 206 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 EEF1A1P68104 462 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 CREB5Q02930 508 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 RELAQ04206 551 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 EEF1A2Q05639 463 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 EPS8Q12929 822 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 ADAM9Q13443 819 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SMAD1Q15797 465 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 TSGA10IPQ3SY00 556 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 MMEL1Q495T6 779 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 EEF1A1P5Q5VTE0 462 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 LAYNQ6UX15 382 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 FAM47EQ6ZV65 393 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 PTCD2Q8WV60 388 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 SMG7Q92540 1137 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 OTULINQ96BN8 352 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 METTL2AQ96IZ6 378 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 SSX3Q99909 188 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SEMA3CQ99985 751 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 GINS4Q9BRT9 223 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 MTMR12Q9C0I1 747 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 PAIP1Q9H074 479 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 KCNF1Q9H3M0 494 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 MAN1C1Q9NR34 630 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 HEBP1Q9NRV9 189 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 OLA1Q9NTK5 396 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 TRNAU1APQ9NX07 287 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 EBF1Q9UH73 591 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SLC12A4Q9UP95 1085 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SIK3Q9Y2K2 1263 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SNX13Q9Y5W8 968 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 BAZ2AQ9UIF9 1905 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 IGSF9BQ9UPX0 1349 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 A0A0J9YVX5 310 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 RBAK-RBAKDNI3L0D1 243 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 KPNA3O00505 521 aaPredicted RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 RGS16O15492 202 aaPredicted RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 GAS7O60861 476 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 ITGB2P05107 769 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 IL6P05231 212 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SBK2P0C263 348 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 CTRB1P17538 263 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 WARSP23381 471 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 FSHRP23945 695 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 IL12AP29459 219 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 RCAN1P53805 252 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 DYNLL1P63167 89 aaKnown RBP5.71□□□□□ -1.5
EBF1-211ENST00000622875 KRT32Q14532 448 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 DSC3Q14574 896 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 UBE3CQ15386 1083 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 TYSND1Q2T9J0 566 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SNAP47Q5SQN1 464 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SLC9A4Q6AI14 798 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 CTRB2Q6GPI1 263 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 FOXR1Q6PIV2 292 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SLC15A3Q8IY34 581 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 GPR65Q8IYL9 337 aa5.71□□□□□ -1.5
EBF1-211ENST00000622875 SPATA20Q8TB22 786 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms