RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 HID1Q8IV36 788 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 DENND6BQ8NEG7 585 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 OR6C4Q8NGE1 309 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 SLC35F5Q8WV83 523 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 SCG3Q8WXD2 468 aaKnown RBP14.78□□□□□ -0.04
SNX12-206ENST00000622259 DHX58Q96C10 678 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 BTN2A3PQ96KV6 586 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 NUDT22Q9BRQ3 303 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 MIS12Q9H081 205 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 MTMR6Q9Y217 621 aa14.78□□□□□ -0.04
SNX12-206ENST00000622259 ZNF106Q9H2Y7 1883 aaKnown RBP14.78□□□□□ -0.04
SNX12-206ENST00000622259 M0QYT0 321 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 AP1G1O43747 822 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 APOEP02649 317 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 ALPIP09923 528 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 GLB1P16278 677 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 B4GALNT1Q00973 533 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 SEPT6Q14141 434 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 NFKBIBQ15653 356 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 ALG11Q2TAA5 492 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 MAP9Q49MG5 647 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 TCTN3Q6NUS6 607 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 LINGO4Q6UY18 593 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 ASB18Q6ZVZ8 466 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 VPS36Q86VN1 386 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 KIAA0895Q8NCT3 520 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 PDCD6IPQ8WUM4 868 aaKnown RBP14.77□□□□□ -0.05
SNX12-206ENST00000622259 ASB12Q8WXK4 309 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 TFAP2BQ92481 460 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 ART4Q93070 314 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 PPP1R16AQ96I34 528 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 LRIT1Q9P2V4 623 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 VPS51Q9UID3 782 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 ERRFI1Q9UJM3 462 aaPredicted RBP14.77□□□□□ -0.05
SNX12-206ENST00000622259 KCNMB2Q9Y691 235 aa14.77□□□□□ -0.05
SNX12-206ENST00000622259 TNRC6AQ8NDV7 1962 aaKnown RBP14.76□□□□□ -0.05
SNX12-206ENST00000622259 CAPN5O15484 640 aaPredicted RBP14.76□□□□□ -0.05
SNX12-206ENST00000622259 B4GAT1O43505 415 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 LDLRP01130 860 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 CTSEP14091 401 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 PNLIPP16233 465 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 L1CAMP32004 1257 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 GGCXP38435 758 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 YPEL5P62699 121 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 AMPD3Q01432 767 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 STK4Q13043 487 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 C16orf46Q6P387 395 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 C22orf39Q6P5X5 142 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 RD3Q7Z3Z2 195 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 ZC3H18Q86VM9 953 aaKnown RBP14.76□□□□□ -0.05
SNX12-206ENST00000622259 GKN2Q86XP6 184 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 CCDC150Q8NCX0 1101 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 CCDC114Q96M63 670 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 ZSWIM1Q9BR11 485 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 GPN2Q9H9Y4 310 aaPredicted RBP14.76□□□□□ -0.05
SNX12-206ENST00000622259 PILRAQ9UKJ1 303 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 ZDHHC9Q9Y397 364 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 MAP4K5Q9Y4K4 846 aa14.76□□□□□ -0.05
SNX12-206ENST00000622259 MRPS18BQ9Y676 258 aaKnown RBP14.76□□□□□ -0.05
SNX12-206ENST00000622259 ARHGEF17Q96PE2 2063 aaPredicted RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 PCNX1Q96RV3 2341 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 IGHV5-10-1A0A0J9YXX1 117 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 KCNU1A8MYU2 1149 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 CALCAP01258 141 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 IGLV3-25P01717 112 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 EIF4EBP2Q13542 120 aaPredicted RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 CUL4BQ13620 913 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 PKP1Q13835 747 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 HLTFQ14527 1009 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNX12-206ENST00000622259 AMZ1Q400G9 498 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 RABGAP1LQ5R372 815 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 TTC39BQ5VTQ0 682 aaPredicted RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 ATL3Q6DD88 541 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 OGFOD3Q6PK18 319 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 TIPARPQ7Z3E1 657 aaKnown RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 PIM3Q86V86 326 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 CCDC13Q8IYE1 715 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 TTC39CQ8N584 583 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 TP53I13Q8NBR0 393 aaPredicted RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 STARD8Q92502 1023 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 CCDC74BQ96LY2 380 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 RPRD1AQ96P16 312 aaPredicted RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 SPRY4Q9C004 299 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 MUC3BQ9H195 1237 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 TMEM8AQ9HCN3 771 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 AKAP7Q9P0M2 348 aaPredicted RBP14.75□□□□□ -0.05
SNX12-206ENST00000622259 FRMD4BQ9Y2L6 1034 aa14.75□□□□□ -0.05
SNX12-206ENST00000622259 MED13LQ71F56 2210 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 NAV3Q8IVL0 2385 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 TCP11X1B4DZS4 312 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 HGSO14964 777 aaPredicted RBP14.74□□□□□ -0.05
SNX12-206ENST00000622259 TSPAN6O43657 245 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 CPNE6O95741 557 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 VDRP11473 427 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 GKP32189 559 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 BLKP51451 505 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 OR1D5P58170 312 aa14.74□□□□□ -0.05
SNX12-206ENST00000622259 PRR30Q53SZ7 412 aaPredicted RBP14.74□□□□□ -0.05
SNX12-206ENST00000622259 FOXD4L5Q5VV16 416 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms