RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 GRIA3P42263 894 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 NEK3P51956 506 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 WDR4P57081 412 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CTBP1Q13363 440 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 C9orf57Q5W0N0 161 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MRPL48Q96GC5 212 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SPAG4Q9NPE6 437 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 PLSCR1O15162 318 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ABCB1P08183 1280 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 SERPINF2P08697 491 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 ARF4P18085 180 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TSPAN8P19075 237 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CCT8P50990 548 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 IL5RAQ01344 420 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 VWA5B1Q5TIE3 1220 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CYP20A1Q6UW02 462 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TRMT11Q7Z4G4 463 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 HPS6Q86YV9 775 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MICU2Q8IYU8 434 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 CLYBLQ8N0X4 340 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 MRPL57Q9BQC6 102 aaKnown RBP8.43□□□□□ -1.06
ALMS1-208ENST00000620466 BBS2Q9BXC9 721 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 TAS2R13Q9NYV9 303 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 COPG2Q9UBF2 871 aa8.43□□□□□ -1.06
ALMS1-208ENST00000620466 LAMA4Q16363 1823 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 SNTNA6NMZ2 147 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 ABLIM1O14639 778 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 SIN3BO75182 1162 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DEFA1P59665 94 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DEFA3P59666 94 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 SLC25A52Q3SY17 297 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PPM1LQ5SGD2 360 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 FAM45BPQ6NSW5 357 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DOK6Q6PKX4 331 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 C6orf89Q6UWU4 347 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 C16orf59Q7L2K0 433 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 TSPAN14Q8NG11 270 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 FAM45AQ8TCE6 357 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 NDRG1Q92597 394 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 FAM120BQ96EK7 910 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PGLYRP2Q96PD5 576 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 HGH1Q9BTY7 390 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DUSP16Q9BY84 665 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 GPR88Q9GZN0 384 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PDZD7Q9H5P4 517 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DHX33Q9H6R0 707 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 XPNPEP1Q9NQW7 623 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DPP7Q9UHL4 492 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 ZMYM5Q9UJ78 669 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 TMCC3Q9ULS5 477 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PRPF19Q9UMS4 504 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 NCKAP1Q9Y2A7 1128 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 COMMD3-BMI1R4GMX3 469 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 TCRBV7S3A2A0A539 114 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DLGAP3O95886 979 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 HNRNPLP14866 589 aaKnown RBP eCLIP8.42□□□□□ -1.065e-6■■■□□ 14.8
ALMS1-208ENST00000620466 ERCC2P18074 760 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 XIAPP98170 497 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 GBE1Q04446 702 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PEX6Q13608 980 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 ATP1A4Q13733 1029 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PFKFB4Q16877 469 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 COMMD2Q86X83 199 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 GPC2Q8N158 579 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 CCDC185Q8N715 623 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 USP7Q93009 1102 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 CDCA5Q96FF9 252 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DPY30Q9C005 99 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 FBXO44Q9H4M3 255 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 CLIC5Q9NZA1 410 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 TRPV2Q9Y5S1 764 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 AP4B1Q9Y6B7 739 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 GSTM1P09488 218 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 FEN1P39748 380 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 ADARP55265 1226 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 ROR2Q01974 943 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 BLMHQ13867 455 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 GJC2Q5T442 439 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 TMEM26Q6ZUK4 368 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 MYLPFQ96A32 169 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 SH3GL1Q99961 368 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 MFSD1Q9H3U5 465 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 NDOR1Q9UHB4 597 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 KDM4FA0A1W2PPD8 638 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PARNO95453 639 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 RPLP2P05387 115 aaKnown RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 SP100P23497 879 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 GRK4P32298 578 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 RAB27AP51159 221 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 CLCN5P51795 746 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 BEX3Q00994 111 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 MBTD1Q05BQ5 628 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 C16orf62Q7Z3J2 963 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DHRSXQ8N5I4 330 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 PTGR2Q8N8N7 351 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-208ENST00000620466 TRPC4APQ8TEL6 797 aa8.42□□□□□ -1.06
ALMS1-208ENST00000620466 DCAKDQ8WVC6 231 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms