RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ST6GALNAC4Q9H4F1 302 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 LIN7BQ9HAP6 207 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 MTRRQ9UBK8 725 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 TBX20Q9UMR3 447 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 DRG1Q9Y295 367 aaKnown RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 WBP11Q9Y2W2 641 aaKnown RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 MN1Q10571 1320 aaPredicted RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 OR5K4A6NMS3 321 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 PLA2G6O60733 806 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 KCNK2O95069 426 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 IL18RAPO95256 599 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 GSNP06396 782 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 RBL1P28749 1068 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 QARSP47897 775 aaKnown RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 HLCSP50747 726 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SRP54P61011 504 aaKnown RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 ILF2Q12905 390 aaKnown RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 SPP2Q13103 211 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 NEDD8Q15843 81 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 FNBP1LQ5T0N5 605 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 TTC39BQ5VTQ0 682 aaPredicted RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 IRAK1BP1Q5VVH5 260 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 ANKRD22Q5VYY1 191 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 CCBE1Q6UXH8 406 aaPredicted RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 SPOCD1Q6ZMY3 1216 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 ZBTB49Q6ZSB9 765 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SNX32Q86XE0 403 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 DSELQ8IZU8 1212 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 PGAM4Q8N0Y7 254 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 FBXO36Q8NEA4 188 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 OR10Z1Q8NGY1 313 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 FEZF2Q8TBJ5 459 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 ZFP90Q8TF47 636 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 LRTOMTQ8WZ04 291 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SNX19Q92543 992 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 HDAC11Q96DB2 347 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 OMA1Q96E52 524 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 DEPDC7Q96QD5 511 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 PCDH9Q9HC56 1237 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SMOXQ9NWM0 555 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SNCAIPQ9Y6H5 919 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 PTPRFP10586 1907 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 KAT6AQ92794 2004 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 A8MX80 341 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 CYB561D2O14569 222 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 PRLP01236 227 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 GNAO1P09471 354 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MBL2P11226 248 aaPredicted RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 HOXB1P14653 301 aaPredicted RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 IMPDH1P20839 514 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 PROZP22891 400 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 PIK3R1P27986 724 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 CCND2P30279 289 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 HCAR3P49019 387 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 NUDT2P50583 147 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MAP3K7CLP57077 242 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 RPL7AP62424 266 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 NOMO3P69849 1222 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 TNK2Q07912 1038 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 BFSP2Q13515 415 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 PXDC1Q5TGL8 231 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 ANGEL2Q5VTE6 544 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 CYP20A1Q6UW02 462 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 CTAGE3PQ8IX95 158 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 OR6F1Q8NGZ6 308 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 ATP6V1E2Q96A05 226 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 NRBF2Q96F24 287 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 REXO5Q96IC2 774 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 CEP19Q96LK0 163 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MFSD14AQ96MC6 490 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 ACAT2Q9BWD1 397 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 CD320Q9NPF0 282 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 IP6K2Q9UHH9 426 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 AP3M1Q9Y2T2 418 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 ZNF195O14628 629 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 DHX15O43143 795 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 DCXO43602 365 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MFN2O95140 757 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 NLRP11P59045 1033 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 MRPS15P82914 257 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 SMARCB1Q12824 385 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 DSC3Q14574 896 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 CARTPTQ16568 116 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 SLC36A3Q495N2 470 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 C5orf22Q49AR2 442 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 BRDTQ58F21 947 aaPredicted RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 MTX3Q5HYI7 312 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 TEDDM1Q5T9Z0 273 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 SHEQ5VZ18 495 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
VPS11-207ENST00000620429 ABRAXAS1Q6UWZ7 409 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
VPS11-207ENST00000620429 GALNT11Q8NCW6 608 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms