RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TMEM233B4DJY2 109 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 H0Y858 1186 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 PMM2O15305 246 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 BCAS1O75363 584 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SNAP29O95721 258 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 CAPN1P07384 714 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 HSPA1AP0DMV8 641 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 HSPA1BP0DMV9 641 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 LRPAP1P30533 357 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SAMD4BQ5PRF9 694 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCNYL2Q5T2Q4 361 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 PAGE2Q7Z2X7 111 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 LDHDQ86WU2 507 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 RALGPS2Q86X27 583 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 ANKRD13AQ8IZ07 590 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 DCLK2Q8N568 766 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 CNTD1Q8N815 330 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 MINDY2Q8NBR6 621 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 OR2T34Q8NGX1 318 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 OR2T3Q8NH03 318 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 CHURC1Q8WUH1 139 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 ELMO1Q92556 727 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLCO4A1Q96BD0 722 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SIGLEC10Q96LC7 697 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 SEPHS2Q99611 448 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 PSD2Q9BQI7 771 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 APOBEC3GQ9HC16 384 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 WDR6Q9NNW5 1121 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 AASDHPPTQ9NRN7 309 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 DSEQ9UL01 958 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 RAP2CQ9Y3L5 183 aa10.48□□□□□ -0.73
TNFAIP3-208ENST00000615468 TCAF2A6NFQ2 919 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SYCE1LA8MT33 242 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TBX1O43435 398 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 NUAK1O60285 661 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 HMGCRP04035 888 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 POLR2IP36954 125 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CAPGP40121 348 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 STILQ15468 1287 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZBTB41Q5SVQ8 909 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCSAPQ6IQ19 270 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 ERMP1Q7Z2K6 904 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 ELMOD2Q8IZ81 293 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CLEC4FQ8N1N0 589 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CRYGNQ8WXF5 182 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 LRRC39Q96DD0 335 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 DOK1Q99704 481 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 MAGEE1Q9HCI5 957 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SMPD3Q9NY59 655 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SUCOQ9UBS9 1254 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 VPS28Q9UK41 221 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SNX2O60749 519 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 RSL1D1O76021 490 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 JUNP05412 331 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 UGT2B4P06133 528 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 MGAT1P26572 445 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PTPN7P35236 360 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 IRF9Q00978 393 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 ORC1Q13415 861 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CYP51A1Q16850 503 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CEP78Q5JTW2 689 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 MAMDC4Q6UXC1 1216 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TTC30BQ8N4P2 665 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TTC39CQ8N584 583 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 FUNDC2Q9BWH2 189 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZDHHC2Q9UIJ5 367 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC39A10Q9ULF5 831 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 HES2Q9Y543 173 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 C3orf70A6NLC5 250 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TK2O00142 265 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 NFKBIEO00221 500 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 NFIBO00712 420 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 KMOO15229 486 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TADA2AO75478 443 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 METTL18O95568 372 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CAP2P40123 477 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PLA2G16P53816 162 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 HMGCS2P54868 508 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 IFITM3Q01628 133 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PRKAA1Q13131 559 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 DGCR6Q14129 220 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TMEM236Q5W0B7 351 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SIGIRRQ6IA17 410 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 STRA8Q7Z7C7 330 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PIGZQ86VD9 579 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 FAM20CQ8IXL6 584 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC43A3Q8NBI5 491 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 OR13F1Q8NGS4 319 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 RPL10LQ96L21 214 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 MFSD14AQ96MC6 490 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 CEP41Q9BYV8 373 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 HOXD1Q9GZZ0 328 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 RPAP3Q9H6T3 665 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZNF408Q9H9D4 720 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PNMA8BQ9ULN7 279 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms