RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 UMODL1-AS1Q8N2C9 162 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 PGBD3Q8N328 593 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 LZTR1Q8N653 840 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 CCDC89Q8N998 374 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 BBOF1Q8ND07 529 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 MDGA1Q8NFP4 955 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 OR2T3Q8NH03 318 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ARHGEF2Q92974 986 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 RPL10LQ96L21 214 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 SPON2Q9BUD6 331 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 LRRC4CQ9HCJ2 640 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 PCDH18Q9HCL0 1135 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ATP13A1Q9HD20 1204 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 BCCIPQ9P287 314 aaKnown RBP eCLIP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ASIC3Q9UHC3 531 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 RAPGEFL1Q9UHV5 662 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 VPS51Q9UID3 782 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 SLCO3A1Q9UIG8 710 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 HS3ST2Q9Y278 367 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 PLXND1Q9Y4D7 1925 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 RASA4BC9J798 803 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 CBX4O00257 560 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 RASA4O43374 803 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ATP9BO43861 1147 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 SNAP91O60641 907 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 C7P10643 843 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 KRT10P13645 584 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 GABRG2P18507 467 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 LSP1P33241 339 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 GJC1P36383 396 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 PXNP49023 591 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 STK19P49842 368 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ARSEP51690 589 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ITGA8P53708 1063 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 GEMIN4P57678 1058 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 MAGOHP61326 146 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 PPP2R2AP63151 447 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 GUCY1A3Q02108 690 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 DPYSQ14117 519 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 USP39Q53GS9 565 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 TNFAIP8L3Q5GJ75 292 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 TFDP3Q5H9I0 405 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ZFYVE27Q5T4F4 411 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 VSIG1Q86XK7 387 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 TMPRSS6Q8IU80 811 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 KCTD6Q8NC69 237 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 CCHCR1Q8TD31 782 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 HMGB4Q8WW32 186 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 RAPGEF5Q92565 580 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 NKD2Q969F2 451 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 CSPG4P5Q96PW8 444 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 FRMD8P1Q9BZ68 369 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 FOXP3Q9BZS1 431 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ROPN1BQ9BZX4 212 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 EPN3Q9H201 632 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 CENPHQ9H3R5 247 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ROPN1Q9HAT0 212 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 ANAPC5Q9UJX4 755 aa8.98□□□□□ -0.97
SMAD4-217ENST00000611848 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
SMAD4-217ENST00000611848 FAM186AA6NE01 2351 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 PTPRZ1P23471 2315 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-217ENST00000611848 THADAQ6YHU6 1953 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ARHGAP42A6NI28 874 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 TTC34A8MYJ7 566 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 DCLK1O15075 740 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 KDELR3O43731 214 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 RNASEH1O60930 286 aaKnown RBP8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ZNF217O75362 1048 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 TCEA3O75764 348 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ZMPSTE24O75844 475 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 AGTP01019 485 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 SRCP12931 536 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 NDUFV2P19404 249 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 KDELR1P24390 212 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 IL4RP24394 825 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 SERPINB6P35237 376 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ACVRL1P37023 503 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ADCY8P40145 1251 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 NUMBP49757 651 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 COPAP53621 1224 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ARF5P84085 180 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 NHLH1Q02575 133 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 DPYSL3Q14195 570 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 OASLQ15646 514 aaKnown RBP8.97□□□□□ -0.97
SMAD4-217ENST00000611848 DLG2Q15700 870 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ACCSLQ4AC99 568 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ODF2Q5BJF6 829 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 UBAP2Q5T6F2 1119 aaKnown RBP8.97□□□□□ -0.97
SMAD4-217ENST00000611848 C9orf64Q5T6V5 341 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 TTC19Q6DKK2 380 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-217ENST00000611848 HIBCHQ6NVY1 386 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-217ENST00000611848 C11orf74Q86VG3 221 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ZNF354CQ86Y25 554 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ZNF366Q8N895 744 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 ATP11CQ8NB49 1132 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 BCAS4Q8TDM0 211 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 FRS2Q8WU20 508 aa8.97□□□□□ -0.97
SMAD4-217ENST00000611848 GAB3Q8WWW8 586 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms