RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 SOX10P56693 466 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 STX5Q13190 355 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 TUBA3CQ13748 450 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 ZNF846Q147U1 533 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 ARL13BQ3SXY8 428 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 USP50Q70EL3 339 aaPredicted RBP12.07□□□□□ -0.48
TP53-220ENST00000610623 XYLT1Q86Y38 959 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 CDKL3Q8IVW4 592 aaPredicted RBP12.07□□□□□ -0.48
TP53-220ENST00000610623 CADM3Q8N126 398 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 OR13F1Q8NGS4 319 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 RAB2BQ8WUD1 216 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 TFAP2BQ92481 460 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 FEM1CQ96JP0 617 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 GATA5Q9BWX5 397 aaPredicted RBP12.07□□□□□ -0.48
TP53-220ENST00000610623 NAA50Q9GZZ1 169 aaKnown RBP12.07□□□□□ -0.48
TP53-220ENST00000610623 UPF3AQ9H1J1 476 aaKnown RBP12.07□□□□□ -0.48
TP53-220ENST00000610623 NANOGQ9H9S0 305 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 ZNF358Q9NW07 568 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 OXSMQ9NWU1 459 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 MTMR10Q9NXD2 777 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 KLHL3Q9UH77 587 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 PSME2Q9UL46 239 aa12.07□□□□□ -0.48
TP53-220ENST00000610623 E7ENX8 843 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 H3BRB1 525 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 DLGAP1O14490 977 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 GRID2O43424 1007 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 MED7O43513 233 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 MPOP05164 745 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 PGAM1P18669 254 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 TKTP29401 623 aaKnown RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 ARPC4P59998 168 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 MPP1Q00013 466 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 FSTL1Q12841 308 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 SEMA5AQ13591 1074 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 ZNF394Q53GI3 561 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 C6orf183Q5T699 404 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 ZNF618Q5T7W0 954 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 DENND1BQ6P3S1 775 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 PTAR1Q7Z6K3 402 aaPredicted RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 EXOC8Q8IYI6 725 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 OR5B17Q8NGF7 314 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 AGR3Q8TD06 166 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 SEPT8Q92599 483 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 HPS1Q92902 700 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 PEBP4Q96S96 227 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 CPNE1Q99829 537 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 MAGEE1Q9HCI5 957 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 MORF4L1Q9UBU8 362 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 IFT52Q9Y366 437 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 TCAF1Q9Y4C2 921 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 PSAT1Q9Y617 370 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 COPG1Q9Y678 874 aaKnown RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 TANC1Q9C0D5 1861 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 CLDN25C9JDP6 229 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 CNMDO75829 334 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 APOA4P06727 396 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 HSPA8P11142 646 aaKnown RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 JUNBP17275 347 aaPredicted RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 MPSTP25325 297 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 ZNF143P52747 638 aaPredicted RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 NSUN2Q08J23 767 aaKnown RBP eCLIP12.06□□□□□ -0.48
TP53-220ENST00000610623 MAPRE2Q15555 327 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 TARBP2Q15633 366 aaKnown RBP12.06□□□□□ -0.48
TP53-220ENST00000610623 DGKDQ16760 1214 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 NXNQ6DKJ4 435 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 METTL7BQ6UX53 244 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 TMCO5AQ8N6Q1 288 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 NIF3L1Q9GZT8 377 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 EHD1Q9H4M9 534 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 SPAG4Q9NPE6 437 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 ANKMY1Q9P2S6 941 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 SLC17A6Q9P2U8 582 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 CD300AQ9UGN4 299 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 NOX1Q9Y5S8 564 aa12.06□□□□□ -0.48
TP53-220ENST00000610623 PIK3R2O00459 728 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 NDUFB5O43674 189 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 GAS2O43903 313 aaKnown RBP12.05□□□□□ -0.48
TP53-220ENST00000610623 RSL1D1O76021 490 aaKnown RBP12.05□□□□□ -0.48
TP53-220ENST00000610623 HMGCRP04035 888 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 GRIA1P42261 906 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 HLCSP50747 726 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 ATP6V0D1P61421 351 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 NME3Q13232 169 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 SAMD4BQ5PRF9 694 aaKnown RBP12.05□□□□□ -0.48
TP53-220ENST00000610623 TMEM198Q66K66 360 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 CYP4V2Q6ZWL3 525 aaPredicted RBP12.05□□□□□ -0.48
TP53-220ENST00000610623 CLEC14AQ86T13 490 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 TTC30BQ8N4P2 665 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 CBR4Q8N4T8 237 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 PQLC3Q8N755 202 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 RDH11Q8TC12 318 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 ADAM32Q8TC27 787 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 SEPT1Q8WYJ6 367 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 C9orf16Q9BUW7 83 aa12.05□□□□□ -0.48
TP53-220ENST00000610623 WDR12Q9GZL7 423 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms