RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 LMX1AQ8TE12 382 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 ASB12Q8WXK4 309 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 SLC39A7Q92504 469 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 CENPIQ92674 756 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 TBC1D31Q96DN5 1066 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 FCRL3Q96P31 734 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 PCDHB18PQ96TA0 734 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 USP29Q9HBJ7 922 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM207AQ9NSI2 230 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 CHD5Q8TDI0 1954 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 AQP9O43315 295 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 BUB1O43683 1085 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 RAMP2O60895 175 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 CSO75390 466 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 UNGP13051 313 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 HDAC4P56524 1084 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 JAM2P57087 298 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 PFN3P60673 137 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 KRT31Q15323 416 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 CDKN3Q16667 212 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 DEFB133Q30KQ1 61 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 WDR59Q6PJI9 974 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 ZNF354CQ86Y25 554 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 SPACA3Q8IXA5 215 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 NETO2Q8NC67 525 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 DENND6BQ8NEG7 585 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 ENOX1Q8TC92 643 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 MAPK15Q8TD08 544 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 FAM172AQ8WUF8 416 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 CENPTQ96BT3 561 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 LGMNQ99538 433 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 ADAM22Q9P0K1 906 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 SALL4Q9UJQ4 1053 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 NEU3Q9UQ49 428 aa13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 SMG1Q96Q15 3661 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-219ENST00000608621 TK2O00142 265 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 AREL1O15033 823 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 EPHB6O15197 1021 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 ATXN7O15265 892 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 MMP20O60882 483 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 ITIH2P19823 946 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 TGM2P21980 687 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 STAT1P42224 750 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 LSSP48449 732 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 GABREP78334 506 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 TLE3Q04726 772 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 C1orf61Q13536 156 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 SCYL2Q6P3W7 929 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 GUSBP11Q6P575 273 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 GPR155Q7Z3F1 870 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 SLFN11Q7Z7L1 901 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 PYROXD2Q8N2H3 581 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 NTAN1Q96AB6 310 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 ARHGEF26Q96DR7 871 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 ZNF578Q96N58 590 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 IL12RB2Q99665 862 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 OSBPL1AQ9BXW6 950 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 TTYH3Q9C0H2 523 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 KLC2Q9H0B6 622 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 TCEAL2Q9H3H9 227 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 NOL6Q9H6R4 1146 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 POLR1BQ9H9Y6 1135 aa13.57□□□□□ -0.24
POLR2J3-219ENST00000608621 GCN1Q92616 2671 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 EME2A4GXA9 379 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 ZSCAN5CA6NGD5 496 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 TPP1O14773 563 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 GCATO75600 419 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 TM7SF2O76062 418 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 TMCC1O94876 653 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 TPM2P07951 284 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 TIMP2P16035 220 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 GPD1P21695 349 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 THOP1P52888 689 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 CXADRP78310 365 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 RAD51Q06609 339 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 C19orf57Q0VDD7 668 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 PTK2BQ14289 1009 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 CLEC16AQ2KHT3 1053 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
POLR2J3-219ENST00000608621 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms