RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 MYF6P23409 242 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 RPS12P25398 132 aaKnown RBP12.03□□□□□ -0.48
CTCFL-217ENST00000608425 CD40LGP29965 261 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 ATICP31939 592 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PLA2G16P53816 162 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-217ENST00000608425 DYNLT1P63172 113 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 HERC3Q15034 1050 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 SNX17Q15036 470 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 GTF2IRD2BQ6EKJ0 949 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PMF1Q6P1K2 205 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 CRTC3Q6UUV7 619 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 GTF2IRD2Q86UP8 949 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 CCDC103Q8IW40 242 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 BBS2Q9BXC9 721 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 SLC38A10Q9HBR0 1119 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 SYTL2Q9HCH5 934 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 KCND2Q9NZV8 630 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PPP1R1BQ9UD71 204 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-217ENST00000608425 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PRPF19Q9UMS4 504 aaKnown RBP12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PCDHGA10Q9Y5H3 936 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PMF1-BGLAPU3KQ54 211 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 LINC01387J3KSC0 135 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 SNX2O60749 519 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PRELPP51888 382 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 MERTKQ12866 999 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 TRIM32Q13049 653 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 GNA13Q14344 377 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 POLD3Q15054 466 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-217ENST00000608425 B3GNT9Q6UX72 402 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 FAM71DQ8N9W8 422 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 FLCNQ8NFG4 579 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 PIK3R3Q92569 461 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 MCMBPQ9BTE3 642 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 FUNDC2Q9BWH2 189 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 COG4Q9H9E3 785 aa12.03□□□□□ -0.48
CTCFL-217ENST00000608425 IFT80Q9P2H3 777 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-217ENST00000608425 TISP43B9A030 160 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 E7ENX8 843 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 AGRPO00253 132 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 EIF3DO15371 548 aaKnown RBP eCLIP12.02□□□□□ -0.48
CTCFL-217ENST00000608425 TBX1O43435 398 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 EPN2O95208 641 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 GZMAP12544 262 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 NFX1Q12986 1120 aaKnown RBP12.02□□□□□ -0.48
CTCFL-217ENST00000608425 TRIM25Q14258 630 aaKnown RBP12.02□□□□□ -0.48
CTCFL-217ENST00000608425 GJC2Q5T442 439 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-217ENST00000608425 XAF1Q6GPH4 301 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 SCML4Q8N228 414 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 NAT8LQ8N9F0 302 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 TNIP2Q8NFZ5 429 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 ELMO1Q92556 727 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 SDCCAG3Q96C92 435 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 BIRC7Q96CA5 298 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 KREMEN1Q96MU8 473 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 APBA2Q99767 749 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 ACAT2Q9BWD1 397 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 GPN2Q9H9Y4 310 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-217ENST00000608425 WASH6PQ9NQA3 447 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 XPO7Q9UIA9 1087 aaKnown RBP12.02□□□□□ -0.48
CTCFL-217ENST00000608425 ZNF221Q9UK13 617 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 VANGL2Q9ULK5 521 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 AP3M1Q9Y2T2 418 aa12.02□□□□□ -0.48
CTCFL-217ENST00000608425 UBE4BO95155 1302 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 HMX2A2RU54 273 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 C9IYK1 514 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 H0YJX3 145 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 TK2O00142 265 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 SEC14L2O76054 403 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 TOMM70O94826 608 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 VAPBO95292 243 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-217ENST00000608425 PPP3CAQ08209 521 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 BFSP1Q12934 665 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 NFIL3Q16649 462 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 TTC39BQ5VTQ0 682 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-217ENST00000608425 TXNRD3NBQ6F5E7 133 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 C16orf89Q6UX73 402 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 SLC16A12Q6ZSM3 486 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-217ENST00000608425 DLG3Q92796 817 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 C1QTNF7Q9BXJ2 289 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 TIGARQ9NQ88 270 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 RPRD1BQ9NQG5 326 aaKnown RBP12.02□□□□□ -0.49
CTCFL-217ENST00000608425 MAP3K20Q9NYL2 800 aaKnown RBP12.02□□□□□ -0.49
CTCFL-217ENST00000608425 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.49
CTCFL-217ENST00000608425 ATP5BP06576 529 aaKnown RBP12.01□□□□□ -0.49
CTCFL-217ENST00000608425 HTR1BP28222 390 aa12.01□□□□□ -0.49
CTCFL-217ENST00000608425 HCAR3P49019 387 aa12.01□□□□□ -0.49
CTCFL-217ENST00000608425 TAGLNQ01995 201 aaKnown RBP12.01□□□□□ -0.49
CTCFL-217ENST00000608425 CCDC14Q49A88 953 aa12.01□□□□□ -0.49
CTCFL-217ENST00000608425 NIPA1Q7RTP0 329 aa12.01□□□□□ -0.49
CTCFL-217ENST00000608425 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
CTCFL-217ENST00000608425 C10orf107Q8IVU9 208 aa12.01□□□□□ -0.49
CTCFL-217ENST00000608425 PDPRQ8NCN5 879 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms