RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 FBXL19Q6PCT2 694 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 ERN2Q76MJ5 926 aaKnown RBP14.44□□□□□ -0.1
CTSA-219ENST00000607841 OR14C36Q8NHC7 312 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 HAUS1Q96CS2 278 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 NUDCD1Q96RS6 583 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 GPR174Q9BXC1 333 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 NT5MQ9NPB1 228 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 SCUBE2Q9NQ36 999 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 GMEB2Q9UKD1 530 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 TPX2Q9ULW0 747 aaKnown RBP14.44□□□□□ -0.1
CTSA-219ENST00000607841 PYCARDQ9ULZ3 195 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTSA-219ENST00000607841 MUC6Q6W4X9 2439 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 CKAP5Q14008 2032 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 A0A1W2PQ67 120 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 KCNK1O00180 336 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 MUSKO15146 869 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 INSIG1O15503 277 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 JCHAINP01591 159 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 ACSL1P33121 698 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 DPP6P42658 865 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 RGRP47804 291 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 OTUD4Q01804 1114 aaKnown RBP14.43□□□□□ -0.1
CTSA-219ENST00000607841 PRKD1Q15139 912 aaPredicted RBP14.43□□□□□ -0.1
CTSA-219ENST00000607841 NOMO1Q15155 1222 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 LPAL2Q16609 132 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 SYCP2LQ5T4T6 812 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 DCAF12L1Q5VU92 463 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 AADACL2Q6P093 401 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 ZC3H18Q86VM9 953 aaKnown RBP14.43□□□□□ -0.1
CTSA-219ENST00000607841 TMEFF1Q8IYR6 380 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 PAF1Q8N7H5 531 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 SUMF1Q8NBK3 374 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 OR2T34Q8NGX1 318 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 ACTL9Q8TC94 416 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 LRRN4Q8WUT4 740 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 RAB7BQ96AH8 199 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 ARRDC3Q96B67 414 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 ZNF419Q96HQ0 510 aaPredicted RBP14.43□□□□□ -0.1
CTSA-219ENST00000607841 KLHL32Q96NJ5 620 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 IL12RB2Q99665 862 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 TLR10Q9BXR5 811 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 SUV39H2Q9H5I1 410 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 DKK3Q9UBP4 350 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 SERGEFQ9UGK8 458 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 TTLL3Q9Y4R7 772 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 CHD5Q8TDI0 1954 aa14.43□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3DA0A087WVF3 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3IA0A087WXS9 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3EA0A087X179 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3KA0A087X1G2 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3FA6NER0 549 aaPredicted RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 FAM47DPA6NHR8 397 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 C16orf96A6NNT2 1141 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3LB9A6J9 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 H7C0C1 242 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 PLRG1O43660 514 aaKnown RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 RETP07949 1114 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3HP0C7X1 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 CR2P20023 1033 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 XPAP23025 273 aaPredicted RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 ATP5OP48047 213 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 DHPSP49366 369 aaPredicted RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 SUOXP51687 545 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 METAP1P53582 386 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 ADPRHP54922 357 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 MAXP61244 160 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 POLR2LP62875 67 aaKnown RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 SLC45A4Q5BKX6 768 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 WDR45BQ5MNZ6 344 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 PIP5KL1Q5T9C9 394 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 AGBL4Q5VU57 503 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 LYSMD4Q5XG99 296 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3GQ6DHY5 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3CQ6IPX1 549 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 NEK5Q6P3R8 708 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 NCEH1Q6PIU2 408 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 BRAT1Q6PJG6 821 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 CDKL3Q8IVW4 592 aaPredicted RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 TBC1D3Q8IZP1 549 aaPredicted RBP14.42□□□□□ -0.1
CTSA-219ENST00000607841 PGBD5Q8N414 524 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 VAT1Q99536 393 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 HERPUD2Q9BSE4 406 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 SEPT10Q9P0V9 454 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 ATP8A1Q9Y2Q0 1164 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 PCDHGA5Q9Y5G8 931 aa14.42□□□□□ -0.1
CTSA-219ENST00000607841 METTL12A8MUP2 240 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 MEI4A8MW99 385 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 SOCS5O75159 536 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 PIGNO95427 931 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 RBP3P10745 1247 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 ADRB3P13945 408 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 CA4P22748 312 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 NFKBIAP25963 317 aa14.41□□□□□ -0.1
CTSA-219ENST00000607841 EIF3EP60228 445 aaKnown RBP14.41□□□□□ -0.1
CTSA-219ENST00000607841 KLF1Q13351 362 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms