RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 ZNF354CQ86Y25 554 aa23.24■■□□□ 1.31
CCDC61-207ENST00000599044 ARFGAP1Q8N6T3 406 aa23.24■■□□□ 1.31
CCDC61-207ENST00000599044 C1QTNF2Q9BXJ5 285 aa23.24■■□□□ 1.31
CCDC61-207ENST00000599044 CBX8Q9HC52 389 aa23.24■■□□□ 1.31
CCDC61-207ENST00000599044 GPR27Q9NS67 375 aa23.24■■□□□ 1.31
CCDC61-207ENST00000599044 DKK4Q9UBT3 224 aa23.24■■□□□ 1.31
CCDC61-207ENST00000599044 LRRC53A6NM62 1247 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 A6NNZ2 444 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 RASA4BC9J798 803 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 INSIG1O15503 277 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 FFAR2O15552 330 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 RASA4O43374 803 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 PIAS2O75928 621 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 POP4O95707 220 aaKnown RBP23.23■■□□□ 1.31
CCDC61-207ENST00000599044 MYF5P13349 255 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 JUPP14923 745 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 TNFAIP3P21580 790 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 TARDBPQ13148 414 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCDC61-207ENST00000599044 MAMLD1Q13495 774 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 FZD2Q14332 565 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 HES3Q5TGS1 186 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 DCUN1D2Q6PH85 259 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 PTAR1Q7Z6K3 402 aaPredicted RBP23.23■■□□□ 1.31
CCDC61-207ENST00000599044 PDCD7Q8N8D1 485 aaKnown RBP23.23■■□□□ 1.31
CCDC61-207ENST00000599044 LRIG1Q96JA1 1093 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 NAP1L5Q96NT1 182 aaPredicted RBP23.23■■□□□ 1.31
CCDC61-207ENST00000599044 TRIM7Q9C029 511 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 TSPY26PQ9H489 355 aa23.23■■□□□ 1.31
CCDC61-207ENST00000599044 ANKRD62A6NC57 917 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 WASH4PA8MWX3 477 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 ZNF211Q13398 564 aaPredicted RBP23.22■■□□□ 1.31
CCDC61-207ENST00000599044 SERINC3Q13530 473 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 CYTH1Q15438 398 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 CA9Q16790 459 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 GDPD4Q6W3E5 623 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 TMC6Q7Z403 805 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 TTYH3Q9C0H2 523 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 KLF15Q9UIH9 416 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 LOC400499M0QZD8 3231 aa23.22■■□□□ 1.31
CCDC61-207ENST00000599044 AREL1O15033 823 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 TSPAN6O43657 245 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 ACP1P24666 158 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 YBEYP58557 167 aaPredicted RBP23.21■■□□□ 1.31
CCDC61-207ENST00000599044 KYAT3Q6YP21 454 aaKnown RBP23.21■■□□□ 1.31
CCDC61-207ENST00000599044 ZNF571Q7Z3V5 609 aaPredicted RBP23.21■■□□□ 1.31
CCDC61-207ENST00000599044 TTC7BQ86TV6 843 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 UMODL1-AS1Q8N2C9 162 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 OR4C6Q8NH72 309 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 HNRNPLLQ8WVV9 542 aaKnown RBP23.21■■□□□ 1.31
CCDC61-207ENST00000599044 RAB7BQ96AH8 199 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 EXOC2Q96KP1 924 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 LENG8Q96PV6 779 aaPredicted RBP23.21■■□□□ 1.31
CCDC61-207ENST00000599044 PEBP4Q96S96 227 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 EPAS1Q99814 870 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 HAUS4Q9H6D7 363 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 DNAJC28Q9NX36 388 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 LHX3Q9UBR4 397 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 MYO6Q9UM54 1294 aa23.21■■□□□ 1.31
CCDC61-207ENST00000599044 ZSCAN5CA6NGD5 496 aaPredicted RBP23.2■■□□□ 1.3
CCDC61-207ENST00000599044 J3KR12 359 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 NEMP1O14524 444 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 NEBLO76041 1014 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 CCDC172P0C7W6 258 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 TIMP2P16035 220 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 INSM1Q01101 510 aaPredicted RBP23.2■■□□□ 1.3
CCDC61-207ENST00000599044 SGCGQ13326 291 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 COL28A1Q2UY09 1125 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 INO80DQ53TQ3 878 aaPredicted RBP23.2■■□□□ 1.3
CCDC61-207ENST00000599044 PLEKHA7Q6IQ23 1121 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 LUZP1Q86V48 1076 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 CELF6Q96J87 481 aaKnown RBP23.2■■□□□ 1.3
CCDC61-207ENST00000599044 VCPIP1Q96JH7 1222 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 GDAP1L1Q96MZ0 367 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 OSBPL1AQ9BXW6 950 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 LRRC19Q9H756 370 aa23.2■■□□□ 1.3
CCDC61-207ENST00000599044 SPTY2D1-AS1A0A0U1RR47 76 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 SMTNL1A8MU46 457 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 MMP20O60882 483 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 CDK4P11802 303 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 PSMA2P25787 234 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 AIF1P55008 147 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 RHOAP61586 193 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 ILKQ13418 452 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 ASIC2Q16515 512 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 PARP15Q460N3 678 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 CENPTQ96BT3 561 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 IFT43Q96FT9 208 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 CATSPERBQ9H7T0 1116 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 PDFQ9HBH1 243 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 PARVAQ9NVD7 372 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 PCSK1NQ9UHG2 260 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 PNMA8BQ9ULN7 279 aaPredicted RBP23.19■■□□□ 1.3
CCDC61-207ENST00000599044 MFHAS1Q9Y4C4 1052 aa23.19■■□□□ 1.3
CCDC61-207ENST00000599044 LY6G6EA0A0G2JKS1 128 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 TMEM191CA6NGB0 347 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 DDX3XO00571 662 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 FPGTO14772 594 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 PIGNO95427 931 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 HNF1BP35680 557 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 PFN3P60673 137 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms