RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	IFI44	Q8TCB0	444 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	BAP1	Q92560	729 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ISG20	Q96AZ6	181 aa	Known RBP	11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ATXN7L3B	Q96GX2	97 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KLHL32	Q96NJ5	620 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SEMA4C	Q9C0C4	833 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CLPB	Q9H078	707 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TMEM248	Q9NWD8	314 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TAB2	Q9NYJ8	693 aa		11.2	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TCRBV5S1A1T	A0A578	114 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TK2	O00142	265 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KRIT1	O00522	736 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KDELR3	O43731	214 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LZTS3	O60299	673 aa	Predicted RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MMP20	O60882	483 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	UGT2B4	P06133	528 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PLEK	P08567	350 aa	Predicted RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	UNG	P13051	313 aa	Predicted RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RHOQ	P17081	205 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	JUND	P17535	347 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ERCC5	P28715	1186 aa	Predicted RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RFC1	P35251	1148 aa	Predicted RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PDX1	P52945	283 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	JAM2	P57087	298 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CXADR	P78310	365 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SKOR1	P84550	965 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CCDC15	Q0P6D6	951 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KIF26B	Q2KJY2	2108 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TCP11X2	Q5H9J9	407 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RWDD4	Q6NW29	188 aa	Known RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PARG	Q86W56	976 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SLC35F3	Q8IY50	421 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	OR2AP1	Q8NGE2	309 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MAPK15	Q8TD08	544 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LMX1A	Q8TE12	382 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ASB12	Q8WXK4	309 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PPP1R16A	Q96I34	528 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ZNF578	Q96N58	590 aa	Predicted RBP	11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	C11orf70	Q9BRQ4	267 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	BOC	Q9BWV1	1114 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	POLR1B	Q9H9Y6	1135 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ENTPD2	Q9Y5L3	495 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CSNK1G3	Q9Y6M4	447 aa		11.19	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CHD5	Q8TDI0	1954 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EME2	A4GXA9	379 aa	Predicted RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NEMP2	A6NFY4	417 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	FPGT	O14772	594 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	YY2	O15391	372 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	AQP9	O43315	295 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TSPAN6	O43657	245 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	POP4	O95707	220 aa	Known RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	GSR	P00390	522 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KRT10	P13645	584 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PTPN9	P43378	593 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RABIF	P47224	123 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ADK	P55263	362 aa	Known RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CDR2	Q01850	454 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	C19orf57	Q0VDD7	668 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SGCG	Q13326	291 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CYTH1	Q15438	398 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TPD52L1	Q16890	204 aa	Predicted RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	WDR59	Q6PJI9	974 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	VPS36	Q86VN1	386 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SFTPA2	Q8IWL1	248 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RYBP	Q8N488	228 aa	Predicted RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	VCPIP1	Q96JH7	1222 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	NSMCE3	Q96MG7	304 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SLC46A1	Q96NT5	459 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	DEPDC7	Q96QD5	511 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	LRRC61	Q9BV99	259 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MAGEH1	Q9H213	219 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	RABGEF1	Q9UJ41	708 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SALL4	Q9UJQ4	1053 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SATB2	Q9UPW6	733 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PAXBP1	Q9Y5B6	917 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MAST4	O15021	2626 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	COL6A6	A6NMZ7	2263 aa		11.18	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	HECTD1	Q9ULT8	2610 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CXorf51A	A0A1B0GTR3	108 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TPP1	O14773	563 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MUSK	O15146	869 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	EFS	O43281	561 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	BUB1B	O60566	1050 aa	Predicted RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TMCC1	O94876	653 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ALPPL2	P10696	532 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PLA2G2A	P14555	144 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	TSHR	P16473	764 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	SOX5	P35711	763 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	MAPKAPK2	P49137	400 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	PCBP4	P57723	403 aa	Known RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	POLR2F	P61218	127 aa	Known RBP	11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	KRT31	Q15323	416 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	WSCD2	Q2TBF2	565 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	ARHGAP40	Q5TG30	622 aa		11.17	□□□□□ -0.62
GRAMD1A-209	ENST00000598580	CDKAL1	Q5VV42	579 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms