RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 SCAMP3O14828 347 aaKnown RBP12.07□□□□□ -0.48
NPC1-214ENST00000593280 GREM1O60565 184 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 TBL1XO60907 577 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 CSPG5O95196 566 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 VAPBO95292 243 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 C1RP00736 705 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 SERPINF2P08697 491 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 HLA-DPA1P20036 260 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 BGNP21810 368 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 GLDCP23378 1020 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 BMPR1AP36894 532 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 MAGEA12P43365 314 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
NPC1-214ENST00000593280 IHHQ14623 411 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 SLC14A2Q15849 920 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 UGP2Q16851 508 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 FYB2Q5VWT5 728 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 FSTL4Q6MZW2 842 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 KYAT3Q6YP21 454 aaKnown RBP12.07□□□□□ -0.48
NPC1-214ENST00000593280 CNTN4Q8IWV2 1026 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 CARNMT1Q8N4J0 409 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 MAB21L3Q8N8X9 362 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 CCDC63Q8NA47 563 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 VPS39Q96JC1 886 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 PSKH2Q96QS6 385 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 FAM167BQ9BTA0 163 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 LRRC3Q9BY71 257 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 ASAH2Q9NR71 780 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 SLC2A6Q9UGQ3 507 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 DCDC2Q9UHG0 476 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 IRAK3Q9Y616 596 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 MTCL1Q9Y4B5 1905 aaKnown RBP12.07□□□□□ -0.48
NPC1-214ENST00000593280 C2orf71A6NGG8 1288 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 CCT8L1PA6NM43 557 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 ANKRD65E5RJM6 399 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 CBX4O00257 560 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 GJB3O75712 270 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 LUC7L3O95232 432 aaKnown RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 TOP3BO95985 862 aaKnown RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 MPOP05164 745 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 FGF1P05230 155 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 F7P08709 466 aaPredicted RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 MYL4P12829 197 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 HADHAP40939 763 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 ABCG1P45844 678 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 ARCN1P48444 511 aaKnown RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 CORO7P57737 925 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 ERVFC1P60507 584 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 SLC7A9P82251 487 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 CDK18Q07002 472 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 PPM1LQ5SGD2 360 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 TSTD2Q5T7W7 516 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 N4BP2L1Q5TBK1 243 aaPredicted RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 NLRP9Q7RTR0 991 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 OTOAQ7RTW8 1153 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 CMC1Q7Z7K0 106 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 FAM217AQ8IXS0 508 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 TTC16Q8NEE8 873 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 GABPB2Q8TAK5 448 aaPredicted RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 PTPRN2Q92932 1015 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 CORO1BQ9BR76 489 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 MCMBPQ9BTE3 642 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 TSSK1BQ9BXA7 367 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 RHOJQ9H4E5 214 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 CFAP97Q9P2B7 532 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 KLHL14Q9P2G3 628 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 ZNF510Q9Y2H8 683 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 MTO1Q9Y2Z2 717 aaKnown RBP12.06□□□□□ -0.48
NPC1-214ENST00000593280 SH3BP1Q9Y3L3 701 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 ACTL7AQ9Y615 435 aa12.06□□□□□ -0.48
NPC1-214ENST00000593280 PDE4DIPQ5VU43 2346 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 A0A1W2PRU2 124 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 HIDE1A8MVS5 230 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 GFRA2O00451 464 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 KLF11O14901 512 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 BIRC5O15392 142 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 CCL16O15467 120 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 SIN3BO75182 1162 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 PAPSS2O95340 614 aaPredicted RBP12.05□□□□□ -0.48
NPC1-214ENST00000593280 EPOP01588 193 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 TROVE2P10155 538 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPC1-214ENST00000593280 PFKLP17858 780 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 ARNTP27540 789 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 ZXDBP98169 803 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 CDH18Q13634 790 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 LAMB3Q13751 1172 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 CNGA3Q16281 694 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 INSCQ1MX18 579 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 ZC3HC1Q86WB0 502 aaKnown RBP12.05□□□□□ -0.48
NPC1-214ENST00000593280 MRPL43Q8N983 215 aaKnown RBP12.05□□□□□ -0.48
NPC1-214ENST00000593280 RAB3IL1Q8TBN0 382 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 POF1BQ8WVV4 589 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 TMA16Q96EY4 203 aaKnown RBP12.05□□□□□ -0.48
NPC1-214ENST00000593280 GPR22Q99680 433 aa12.05□□□□□ -0.48
NPC1-214ENST00000593280 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
NPC1-214ENST00000593280 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms