RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NCOA3Q9Y6Q9 1424 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 A0A0G2JK05 382 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 FAM170AA1A519 330 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 EIF3FO00303 357 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-216ENST00000593223 CBX6O95503 412 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 WEE2P0C1S8 567 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 ARSAP15289 507 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 BYSLQ13895 437 aaKnown RBP5.26□□□□□ -1.57
SMAD4-216ENST00000593223 SEMA3AQ14563 771 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 PTGR1Q14914 329 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 TAF11Q15544 211 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 AP5B1Q2VPB7 878 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 ZNF260Q3ZCT1 412 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 VWA5B1Q5TIE3 1220 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 TMEM268Q5VZI3 342 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 AADACL2Q6P093 401 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 KDELC2Q7Z4H8 507 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 CHCHD4Q8N4Q1 142 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 OTUD6BQ8N6M0 293 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 NCSTNQ92542 709 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 STAMQ92783 540 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 SERINC2Q96SA4 455 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 MYCBPQ99417 103 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-216ENST00000593223 CTDSP1Q9GZU7 261 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 RIC8AQ9NPQ8 531 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 TLR8Q9NR97 1041 aaKnown RBP5.26□□□□□ -1.57
SMAD4-216ENST00000593223 UPB1Q9UBR1 384 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 ODF2LQ9ULJ1 636 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 SLC45A1Q9Y2W3 748 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 GOLGB1Q14789 3259 aaKnown RBP5.26□□□□□ -1.57
SMAD4-216ENST00000593223 TMEM2Q9UHN6 1383 aa5.26□□□□□ -1.57
SMAD4-216ENST00000593223 TNS1Q9HBL0 1735 aaKnown RBP5.26□□□□□ -1.57
SMAD4-216ENST00000593223 FMN1Q68DA7 1419 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 MYMKA6NI61 221 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 PEX12O00623 359 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 HBP1O60381 514 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 EPN2O95208 641 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 CCT4P50991 539 aaKnown RBP5.25□□□□□ -1.57
SMAD4-216ENST00000593223 MVDP53602 400 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 EIF5P55010 431 aaKnown RBP5.25□□□□□ -1.57
SMAD4-216ENST00000593223 PPATQ06203 517 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 DDX10Q13206 875 aaKnown RBP5.25□□□□□ -1.57
SMAD4-216ENST00000593223 IL13RA2Q14627 380 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 NUGGCQ68CJ6 796 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 DENND1BQ6P3S1 775 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 FAM217AQ8IXS0 508 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 SCAIQ8N9R8 606 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 LSM14AQ8ND56 463 aaKnown RBP5.25□□□□□ -1.57
SMAD4-216ENST00000593223 LPAR1Q92633 364 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 MSI2Q96DH6 328 aaKnown RBP5.25□□□□□ -1.57
SMAD4-216ENST00000593223 MASTLQ96GX5 879 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 PNRC2Q9NPJ4 139 aaKnown RBP5.25□□□□□ -1.57
SMAD4-216ENST00000593223 CDH22Q9UJ99 828 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 GDAQ9Y2T3 454 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 RAP2CQ9Y3L5 183 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 NUP188Q5SRE5 1749 aa5.25□□□□□ -1.57
SMAD4-216ENST00000593223 DLC1Q96QB1 1528 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 B4DGG1 531 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 KLK10O43240 276 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 ATG13O75143 517 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 HMMRO75330 724 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 MTA2O94776 668 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 TMCC1O94876 653 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 CNPP09543 421 aaKnown RBP5.24□□□□□ -1.57
SMAD4-216ENST00000593223 TGFB3P10600 412 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 PEX19P40855 299 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 CLK1P49759 484 aaKnown RBP5.24□□□□□ -1.57
SMAD4-216ENST00000593223 RGS19P49795 217 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 TMPRSS3P57727 454 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 TWIST1Q15672 202 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 WDR45BQ5MNZ6 344 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 JAKMIP3Q5VZ66 844 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-216ENST00000593223 LRRC57Q8N9N7 239 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 USP38Q8NB14 1042 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 FAR1Q8WVX9 515 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 RNFT2Q96EX2 444 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 FRG2BQ96QU4 278 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 TWNKQ96RR1 684 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 FAM234AQ9H0X4 552 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 RNF146Q9NTX7 359 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 ZBTB40Q9NUA8 1239 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 C9orf78Q9NZ63 289 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-216ENST00000593223 TBC1D14Q9P2M4 693 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 ISY1Q9ULR0 285 aaKnown RBP5.24□□□□□ -1.57
SMAD4-216ENST00000593223 SLC4A4Q9Y6R1 1079 aa5.24□□□□□ -1.57
SMAD4-216ENST00000593223 MST1RQ04912 1400 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 SLIT2O94813 1529 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 GPATCH8Q9UKJ3 1502 aaKnown RBP5.23□□□□□ -1.57
SMAD4-216ENST00000593223 TRBV5-7A0A0A0MS05 114 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 VWA3AA6NCI4 1184 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 PABPN1LA6NDY0 278 aaKnown RBP5.23□□□□□ -1.57
SMAD4-216ENST00000593223 MDM4O15151 490 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 TSPAN3O60637 253 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 DDAH2O95865 285 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 CRYABP02511 175 aaKnown RBP5.23□□□□□ -1.57
SMAD4-216ENST00000593223 TBXAS1P24557 533 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-216ENST00000593223 PRKCHP24723 683 aa5.23□□□□□ -1.57
SMAD4-216ENST00000593223 MAPK9P45984 424 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms