RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PDK1Q15118 436 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 PARP15Q460N3 678 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 C4orf22Q6V702 233 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 TRMT11Q7Z4G4 463 aaKnown RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ZNF354CQ86Y25 554 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 CHCHD4Q8N4Q1 142 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ZNF513Q8N8E2 541 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 USP33Q8TEY7 942 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 CYB5D2Q8WUJ1 264 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 CASKIN2Q8WXE0 1202 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 SORCS1Q8WY21 1168 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ARHGEF2Q92974 986 aaKnown RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 TTC17Q96AE7 1141 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ALG14Q96F25 216 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 CELF6Q96J87 481 aaKnown RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 C2orf49Q9BVC5 232 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 NOL6Q9H6R4 1146 aaKnown RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 PCDH9Q9HC56 1237 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ATP13A1Q9HD20 1204 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 WHRNQ9P202 907 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 SAE1Q9UBE0 346 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 HEY1Q9Y5J3 304 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 F5P12259 2224 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SPAARA0A1B0GVQ0 90 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ARHGAP42A6NI28 874 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 RASA4BC9J798 803 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 H7C0C1 242 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 CBX4O00257 560 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 DFFAO00273 331 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 NPC1O15118 1278 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 RASA4O43374 803 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ATG13O75143 517 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 KRT14P02533 472 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 MX2P20592 715 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ACVRL1P37023 503 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 KIR2DL1P43626 348 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ATP5OP48047 213 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ST8SIA6P61647 398 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SIM1P81133 766 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 CAV1Q03135 178 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ZNF33AQ06730 810 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 HSF5Q4G112 596 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 FNDC3BQ53EP0 1204 aaKnown RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SLC45A4Q5BKX6 768 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 EGFLAMQ63HQ2 1017 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SDE2Q6IQ49 451 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 DARS2Q6PI48 645 aaKnown RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 FBXO38Q6PIJ6 1188 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 CHPFQ8IZ52 775 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 NPWQ8N729 165 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 DCAF4L2Q8NA75 395 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 RPLP0P6Q8NHW5 317 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ACDQ96AP0 544 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 LRRC45Q96CN5 670 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 HMCESQ96FZ2 354 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 OLFM3Q96PB7 478 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 FAM118BQ9BPY3 351 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 TRIM51Q9BSJ1 452 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ACE2Q9BYF1 805 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SLC39A8Q9C0K1 460 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 KLC2Q9H0B6 622 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SLC32A1Q9H598 525 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 DTLQ9NZJ0 730 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 THAP10Q9P2Z0 257 aaPredicted RBP12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ASIC3Q9UHC3 531 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 SLC25A13Q9UJS0 675 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ERVW-1Q9UQF0 538 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 MFHAS1Q9Y4C4 1052 aa12.09□□□□□ -0.47
DDX39A-219ENST00000592927 ANTXRLA6NF34 631 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 ZSCAN5CA6NGD5 496 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SGK1O00141 431 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 KHNYNO15037 678 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 KDELR3O43731 214 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 MFSD11O43934 449 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SNAP91O60641 907 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 KLF8O95600 359 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SRPRAP08240 638 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 HNRNPLP14866 589 aaKnown RBP eCLIP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 ITIH2P19823 946 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 NNMTP40261 264 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 CTSOP43234 321 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 CARSP49589 748 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 PAPOLAP51003 745 aaKnown RBP12.08□□□□□ -0.48
DDX39A-219ENST00000592927 GBE1Q04446 702 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 CALCOCO2Q13137 446 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 SERINC3Q13530 473 aa12.08□□□□□ -0.48
DDX39A-219ENST00000592927 ZNF234Q14588 700 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms