RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	C1orf61	Q13536	156 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	NR0B2	Q15466	257 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	CLEC14A	Q86T13	490 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	FAM131B	Q86XD5	332 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	DRC7	Q8IY82	874 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	DENND6B	Q8NEG7	585 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	CFAP57	Q96MR6	1250 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	CLPB	Q9H078	707 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	APOBEC3B	Q9UH17	382 aa	Known RBP	18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	IPO11	Q9UI26	975 aa	Known RBP	18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	RWDD2A	Q9UIY3	292 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	TMEM59L	Q9UK28	342 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	NEU3	Q9UQ49	428 aa		18.58	■□□□□ 0.56
CIRBP-238	ENST00000592412	AREL1	O15033	823 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	TCEA3	O75764	348 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	FGFR1OP	O95684	399 aa	Known RBP	18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	CELA2B	P08218	269 aa	Predicted RBP	18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	SGCG	Q13326	291 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	PRRT3	Q5FWE3	981 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	C6orf132	Q5T0Z8	1188 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	MANEAL	Q5VSG8	457 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	ZSCAN30	Q86W11	494 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	CREBRF	Q8IUR6	639 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	PLPP6	Q8IY26	295 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	TPCN2	Q8NHX9	752 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	ISG20	Q96AZ6	181 aa	Known RBP	18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	C18orf8	Q96DM3	657 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	IL12RB2	Q99665	862 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	PAXBP1	Q9Y5B6	917 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	FLNC	Q14315	2725 aa		18.57	■□□□□ 0.56
CIRBP-238	ENST00000592412	LMO7DN	F2Z398	122 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	NTN3	O00634	580 aa	Predicted RBP	18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	RIOK3	O14730	519 aa	Known RBP	18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	EFS	O43281	561 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	ADK	P55263	362 aa	Known RBP	18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	ZNF805	Q5CZA5	627 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	LRRC73	Q5JTD7	316 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	FOXR1	Q6PIV2	292 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	NLRP14	Q86W24	1093 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	PHACTR4	Q8IZ21	702 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	TMEM35B	Q8NCS4	154 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	WDR36	Q8NI36	951 aa	Known RBP	18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	ARHGEF2	Q92974	986 aa	Known RBP	18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	RAB7B	Q96AH8	199 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	MED8	Q96G25	268 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	CCDC3	Q9BQI4	270 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	MAGEB5	Q9BZ81	275 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	MBNL1	Q9NR56	388 aa	Known RBP	18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	SPAST	Q9UBP0	616 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	RABGEF1	Q9UJ41	708 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	AHCTF1	Q8WYP5	2266 aa		18.56	■□□□□ 0.56
CIRBP-238	ENST00000592412	PTPN13	Q12923	2485 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	CXorf51A	A0A1B0GTR3	108 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	YY2	O15391	372 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	TNFSF15	O95150	251 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	UGT2B4	P06133	528 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	CYP11B1	P15538	503 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	TSHR	P16473	764 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	ITIH2	P19823	946 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	LEKR1	Q6ZMV7	388 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	NYAP1	Q6ZVC0	841 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	B3GNT8	Q7Z7M8	397 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	OR2AP1	Q8NGE2	309 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	BTN2A2	Q8WVV5	523 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	TBATA	Q96M53	351 aa		18.55	■□□□□ 0.56
CIRBP-238	ENST00000592412	FAM72C	H0Y354	149 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	GOLGA8S	H3BPF8	625 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	GSR	P00390	522 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	ARL13B	Q3SXY8	428 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	FAM72A	Q5TYM5	149 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	TAF3	Q5VWG9	929 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	FAM72D	Q6L9T8	149 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	VPS36	Q86VN1	386 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	FAM72B	Q86X60	149 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	ARL14	Q8N4G2	192 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	EMC1	Q8N766	993 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	TP53I13	Q8NBR0	393 aa	Predicted RBP	18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	NAT6	Q93015	286 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	CCDC97	Q96F63	343 aa	Predicted RBP	18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	KLHL32	Q96NJ5	620 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	FHOD1	Q9Y613	1164 aa		18.54	■□□□□ 0.56
CIRBP-238	ENST00000592412	CCDC187	A0A096LP49	1063 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	KRIT1	O00522	736 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	NEMP1	O14524	444 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	MMP20	O60882	483 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	ITGA2B	P08514	1039 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	MLLT3	P42568	568 aa	Predicted RBP	18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	THOP1	P52888	689 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	NRG1	Q02297	640 aa	Predicted RBP	18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	MIIP	Q5JXC2	388 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	MACC1	Q6ZN28	852 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	CCDC81	Q6ZN84	652 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	NOP9	Q86U38	636 aa	Known RBP	18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	RYBP	Q8N488	228 aa	Predicted RBP	18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	EXD3	Q8N9H8	876 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	LIN37	Q96GY3	246 aa	Predicted RBP	18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	TMEM51	Q9NW97	253 aa		18.53	■□□□□ 0.56

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