RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RPLP0P6Q8NHW5 317 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 KIAA1524Q8TCG1 905 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CYB5D2Q8WUJ1 264 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SORCS1Q8WY21 1168 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 KRT35Q92764 455 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CELF6Q96J87 481 aaKnown RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CSPG4P5Q96PW8 444 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SLC2A11Q9BYW1 496 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 IRX2Q9BZI1 471 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 IRF2BPLQ9H1B7 796 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 EPN3Q9H201 632 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CATSPERBQ9H7T0 1116 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 FBRSL1Q9HCM7 1045 aaKnown RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 ATP13A1Q9HD20 1204 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 PACSIN2Q9UNF0 486 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 PLAAQ9Y263 795 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MTF2Q9Y483 593 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MFHAS1Q9Y4C4 1052 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SHISA7A6NL88 538 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 PRRT4C9JH25 899 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CBX4O00257 560 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 DFFAO00273 331 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 DLL1O00548 723 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 NCAM2O15394 837 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 POLR2EP19388 210 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 AOC1P19801 751 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 AMPD1P23109 780 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 HOXC13P31276 330 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 HTR7P34969 479 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CTNNA1P35221 906 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SERPINB6P35237 376 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ACVRL1P37023 503 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 STK19P49842 368 aaPredicted RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 OXCT1P55809 520 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 GNA12Q03113 381 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SUZ12Q15022 739 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 EIF4HQ15056 248 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 LLGL1Q15334 1064 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ATP13A4Q4VNC1 1196 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ZC3H12BQ5HYM0 836 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CCDC181Q5TID7 509 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 KAZNQ674X7 775 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 RNF43Q68DV7 783 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 IL31Q6EBC2 164 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 PKN3Q6P5Z2 889 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 TMCO3Q6UWJ1 677 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SERPINA13PQ6UXR4 307 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 LINGO4Q6UY18 593 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 LEKR1Q6ZMV7 388 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 NLRP14Q86W24 1093 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 WFDC8Q8IUA0 241 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 MAP7D3Q8IWC1 876 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CHPFQ8IZ52 775 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 C17orf53Q8N3J3 647 aaPredicted RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 FBXL6Q8N531 539 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ATPAF2Q8N5M1 289 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CCDC33Q8N5R6 958 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ALLCQ8N6M5 410 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 GPR161Q8N6U8 529 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 NPWQ8N729 165 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 UBL4BQ8N7F7 174 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 GOLGA6L1Q8N7Z2 621 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF366Q8N895 744 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 LRRC57Q8N9N7 239 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 DCAF4L2Q8NA75 395 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 OR52K2Q8NGK3 314 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 FIBINQ8TAL6 211 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 UCMAQ8WVF2 138 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 RAPGEF5Q92565 580 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 EZH1Q92800 747 aaPredicted RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ACDQ96AP0 544 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 HAUS1Q96CS2 278 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 TRIM44Q96DX7 344 aaPredicted RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 HMCESQ96FZ2 354 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 RBM41Q96IZ5 413 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 C1orf74Q96LT6 269 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 PSMB7Q99436 277 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF670Q9BS34 389 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 WNT10AQ9GZT5 417 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 LMAN1LQ9HAT1 526 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SP110Q9HB58 689 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM248Q9NWD8 314 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SPATA6Q9NWH7 488 aaPredicted RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CWC15Q9P013 229 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SLC25A13Q9UJS0 675 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 AMFRQ9UKV5 643 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 HIF3AQ9Y2N7 669 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 SIT1Q9Y3P8 196 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ALG6Q9Y672 507 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 CKAP5Q14008 2032 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 MUC6Q6W4X9 2439 aa6.54□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF318Q5VUA4 2279 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 CHD5Q8TDI0 1954 aa6.53□□□□□ -1.36
VPS4B-205ENST00000591383 A0A0D9SEW6 157 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms