RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 PREBQ9HCU5 417 aa18.29■□□□□ 0.52
VAT1-208ENST00000590924 PCSK1NQ9UHG2 260 aa18.29■□□□□ 0.52
VAT1-208ENST00000590924 TFR2Q9UP52 801 aa18.29■□□□□ 0.52
VAT1-208ENST00000590924 FARP1Q9Y4F1 1045 aaPredicted RBP18.29■□□□□ 0.52
VAT1-208ENST00000590924 GPSM3Q9Y4H4 160 aa18.29■□□□□ 0.52
VAT1-208ENST00000590924 DUSP10Q9Y6W6 482 aa18.29■□□□□ 0.52
VAT1-208ENST00000590924 LAMA5O15230 3695 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 E9PAM4 449 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 BUB1BO60566 1050 aaPredicted RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 SNAP91O60641 907 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 LDOC1O95751 146 aaPredicted RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 MT-CO1P00395 513 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 KRT7P08729 469 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 MAT2AP31153 395 aaKnown RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 HCAR3P49019 387 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 CLCN6P51797 869 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 TAS2R38P59533 333 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 SLC25A11Q02978 314 aaKnown RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 POM121L1PQ3SYA9 428 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 CCDC157Q569K6 752 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 ARTNQ5T4W7 220 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 PIP5KL1Q5T9C9 394 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 MANEALQ5VSG8 457 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 POLNQ7Z5Q5 900 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 SPATS2Q86XZ4 545 aaKnown RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 OR2A12Q8NGT7 310 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 CNDP2Q96KP4 475 aaKnown RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 PEBP4Q96S96 227 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 SNRNP25Q9BV90 132 aaKnown RBP18.28■□□□□ 0.52
VAT1-208ENST00000590924 TMPRSS4Q9NRS4 437 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 SALL4Q9UJQ4 1053 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 AP4E1Q9UPM8 1137 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 SNX10Q9Y5X0 201 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 ALG6Q9Y672 507 aa18.28■□□□□ 0.52
VAT1-208ENST00000590924 A0A0D9SEW6 157 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 PRAMEF26H0Y7S4 382 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 BNIP3LO60238 219 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 CTSLP07711 333 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 C1SP09871 688 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 CDK4P11802 303 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 IL1R2P27930 398 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 CHRNA3P32297 505 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
VAT1-208ENST00000590924 CCDC15Q0P6D6 951 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 STAT4Q14765 748 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 DPYSL2Q16555 572 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 C6orf118Q5T5N4 469 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 NEK5Q6P3R8 708 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 KANSL1Q7Z3B3 1105 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 TFAP2DQ7Z6R9 452 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 TMPRSS12Q86WS5 348 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 MARCH9Q86YJ5 346 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 TMIEQ8NEW7 156 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 EPAS1Q99814 870 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 ZYG11BQ9C0D3 744 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 KCNF1Q9H3M0 494 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 DONSONQ9NYP3 566 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 MPP6Q9NZW5 540 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 ZNF212Q9UDV6 495 aa18.27■□□□□ 0.52
VAT1-208ENST00000590924 FAM149AA5PLN7 773 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 TRABD2BA6NFA1 517 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 K7ERQ8 282 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 CBX4O00257 560 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 KPNA3O00505 521 aaPredicted RBP18.26■□□□□ 0.51
VAT1-208ENST00000590924 RNGTTO60942 597 aaKnown RBP18.26■□□□□ 0.51
VAT1-208ENST00000590924 SRGAP2O75044 1071 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 RFPL3O75679 317 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 PRNPP04156 253 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 RARAP10276 462 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 OR1E1P30953 314 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 SSR1P43307 286 aaKnown RBP18.26■□□□□ 0.51
VAT1-208ENST00000590924 ACADVLP49748 655 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 BNIP3Q12983 259 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 C22orf39Q6P5X5 142 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 ZNF783Q6ZMS7 281 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 EID2Q8N6I1 236 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 PDCD7Q8N8D1 485 aaKnown RBP18.26■□□□□ 0.51
VAT1-208ENST00000590924 FAM71BQ8TC56 605 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 KIAA1524Q8TCG1 905 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 TSC1Q92574 1164 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 TBC1D31Q96DN5 1066 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 DHX35Q9H5Z1 703 aaKnown RBP18.26■□□□□ 0.51
VAT1-208ENST00000590924 PPP2R2CQ9Y2T4 447 aa18.26■□□□□ 0.51
VAT1-208ENST00000590924 ATRXP46100 2492 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 NBEAQ8NFP9 2946 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 SHROOM3Q8TF72 1996 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 ILVBLA1L0T0 632 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 TMEM110-MUSTN1A8MSY1 372 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 FAM72CH0Y354 149 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 SMAD6O43541 496 aaKnown RBP18.25■□□□□ 0.51
VAT1-208ENST00000590924 BUB1O43683 1085 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 LRIG2O94898 1065 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 TCF4P15884 667 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 RHOQP17081 205 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 COMTP21964 271 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 DNAJC3Q13217 504 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 PDK2Q15119 407 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 FAM72AQ5TYM5 149 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 FAM72DQ6L9T8 149 aa18.25■□□□□ 0.51
VAT1-208ENST00000590924 LINGO4Q6UY18 593 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms