RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SLC2A3P11169 496 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 KRT10P13645 584 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CCR1P32246 355 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CHRNA3P32297 505 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 PRCPP42785 496 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 EPHA4P54764 986 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CLDN2P57739 230 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 PSMA6P60900 246 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 KRT83P78385 493 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ZNF177Q13360 481 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 AUHQ13825 339 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 FZD2Q14332 565 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CDKN3Q16667 212 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 LINC00303Q3SY05 128 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 RABGAP1LQ5R372 815 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 SEL1L3Q68CR1 1132 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ZCCHC8Q6NZY4 707 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 GCNT7Q6ZNI0 430 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ERN2Q76MJ5 926 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 CIR1Q86X95 450 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 SMYD4Q8IYR2 804 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 ZNF295-AS1Q8N0V1 137 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 SLC22A18ASQ8N1D0 253 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 PPM1KQ8N3J5 372 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ARL14Q8N4G2 192 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 EXD3Q8N9H8 876 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 OR52K2Q8NGK3 314 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 OR2A12Q8NGT7 310 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 LMO3Q8TAP4 145 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 KAT5Q92993 513 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 RNF34Q969K3 372 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 SLC35C1Q96A29 364 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ARRDC3Q96B67 414 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 FEM1CQ96JP0 617 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 RPRD1AQ96P16 312 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 NT5C1BQ96P26 610 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CCNL2Q96S94 520 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.45□□□□□ -1.543e-7■□□□□ 8.7
VAPA-207ENST00000583879 SLC17A9Q9BYT1 436 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 METTL14Q9HCE5 456 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 NEUROD4Q9HD90 331 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 FZD3Q9NPG1 666 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 DYRK4Q9NR20 520 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 DNAJC28Q9NX36 388 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 NCKIPSDQ9NZQ3 722 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ARMCX3Q9UH62 379 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 VPS28Q9UK41 221 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ZNF232Q9UNY5 417 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 ZFR2Q9UPR6 939 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 HS3ST2Q9Y278 367 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 TBC1D30Q9Y2I9 924 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 GPC6Q9Y625 555 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 HELZ2Q9BYK8 2649 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 KNTC1P50748 2209 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 TMEM131Q92545 1883 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 KNL1Q8NG31 2342 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 SERTM1A2A2V5 107 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 E5RJQ4 531 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 K7ERQ8 282 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 RNF103O00237 685 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 KPNA3O00505 521 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 AQP9O43315 295 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 SMAD6O43541 496 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 CLDN11O75508 207 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 TCEA3O75764 348 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ZNF202O95125 648 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 GJB6O95452 261 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ALBP02768 609 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 PRNPP04156 253 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 SRCP12931 536 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 NME1P15531 152 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 NOS2P35228 1153 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 FMO5P49326 533 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 PMS1P54277 932 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 INHBCP55103 352 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 CDH4P55283 916 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 RPS21P63220 83 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 PITX1P78337 314 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 CDK17Q00537 523 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 SRSF1Q07955 248 aaKnown RBP eCLIP5.44□□□□□ -1.54
VAPA-207ENST00000583879 CETN1Q12798 172 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 NFATC3Q12968 1075 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 MTA1Q13330 715 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 PKP1Q13835 747 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 PDE1CQ14123 709 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 FGL2Q14314 439 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 NR0B2Q15466 257 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 TAF5Q15542 800 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 DEFB133Q30KQ1 61 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ZSCAN23Q3MJ62 389 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 C5orf22Q49AR2 442 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 COBLL1Q53SF7 1204 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 OR6B2Q6IFH4 312 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 DENND1BQ6P3S1 775 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 GUSBP11Q6P575 273 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 KYAT3Q6YP21 454 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 RBM44Q6ZP01 1051 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 USP53Q70EK8 1073 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 RRAGAQ7L523 313 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 EFL1Q7Z2Z2 1120 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms