RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 LMAN1LQ9HAT1 526 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 ARFGAP3Q9NP61 516 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 FARP1Q9Y4F1 1045 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TTLL3Q9Y4R7 772 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TTC24A2A3L6 582 aaPredicted RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TYW5A2RUC4 315 aaKnown RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 K7ESF4 209 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MATN3O15232 486 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MAP3K13O43283 966 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 PEX11BO96011 259 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 CCNB1P14635 433 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 ARSAP15289 507 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 CCNCP24863 283 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 OXCT1P55809 520 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 IFI35P80217 286 aaPredicted RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 DHX9Q08211 1270 aaKnown RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 LMAN2Q12907 356 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 OLIG2Q13516 323 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 CDH18Q13634 790 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 SPARCL1Q14515 664 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 KCNJ11Q14654 390 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 PARP15Q460N3 678 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MPPE1Q53F39 396 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TEX44Q53QW1 395 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 HP1BP3Q5SSJ5 553 aaPredicted RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TTC39BQ5VTQ0 682 aaPredicted RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 FYB2Q5VWT5 728 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TANGO2Q6ICL3 276 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TCEAL6Q6IPX3 200 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 WDR5BQ86VZ2 330 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MFN1Q8IWA4 741 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 PPIL6Q8IXY8 311 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 CPXM2Q8N436 756 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 CNTD1Q8N815 330 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 NAT8LQ8N9F0 302 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 BBOF1Q8ND07 529 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MAML1Q92585 1016 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 TCEAL3Q969E4 200 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 CAVIN3Q969G5 261 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 ZFYVE19Q96K21 471 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 ASB16Q96NS5 453 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 FERMT1Q9BQL6 677 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MUC3BQ9H195 1237 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 ATP13A1Q9HD20 1204 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 NT5MQ9NPB1 228 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 UBP1Q9NZI7 540 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 MTRF1LQ9UGC7 380 aaKnown RBP10.23□□□□□ -0.77
CRLF3-202ENST00000577725 RSPH14Q9UHP6 348 aa10.23□□□□□ -0.77
CRLF3-202ENST00000577725 ILVBLA1L0T0 632 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 HEPACAM2A8MVW5 462 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 NEDD8-MDP1E9PL57 170 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 CBX4O00257 560 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 PRAMEF11O60813 436 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 OPHN1O60890 802 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 GJB3O75712 270 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 SASH3O75995 380 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 NEBLO76041 1014 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 TRIM16O95361 564 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 TCF3P15923 654 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 FCARP24071 287 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 HOXA6P31267 233 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 CD70P32970 193 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 FDFT1P37268 417 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 GRIA1P42261 906 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 IFNAR2P48551 515 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 LMAN1P49257 510 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 YBEYP58557 167 aaPredicted RBP10.22□□□□□ -0.77
CRLF3-202ENST00000577725 MAXP61244 160 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 IL10RBQ08334 325 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 SLC10A7Q0GE19 358 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 MORF4L2Q15014 288 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 UAP1Q16222 522 aaPredicted RBP10.22□□□□□ -0.77
CRLF3-202ENST00000577725 ANO4Q32M45 955 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 LY6G5CQ5SRR4 150 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 FNBP1LQ5T0N5 605 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 TIGD7Q6NT04 549 aaPredicted RBP10.22□□□□□ -0.77
CRLF3-202ENST00000577725 EMBQ6PCB8 327 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 LINGO4Q6UY18 593 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 TMC3Q7Z5M5 1100 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 APCDD1Q8J025 514 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 NAT16Q8N8M0 369 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 UHMK1Q8TAS1 419 aaKnown RBP10.22□□□□□ -0.77
CRLF3-202ENST00000577725 GAB3Q8WWW8 586 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 DNASE1L2Q92874 299 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 SMARCD2Q92925 531 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 TEKT5Q96M29 485 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 IL12RB2Q99665 862 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 MLPHQ9BV36 600 aaPredicted RBP10.22□□□□□ -0.77
CRLF3-202ENST00000577725 BBS2Q9BXC9 721 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 PLA2G2FQ9BZM2 168 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 MAGEH1Q9H213 219 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 GBA3Q9H227 469 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 KIF9Q9HAQ2 790 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 GLOD4Q9HC38 313 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 SAYSD1Q9NPB0 183 aa10.22□□□□□ -0.77
CRLF3-202ENST00000577725 PIH1D1Q9NWS0 290 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms