RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CCNCP24863 283 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PTPN7P35236 360 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NUDT1P36639 197 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PTGER3P43115 390 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MMP13P45452 471 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DYNLT1P63172 113 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PPIDQ08752 370 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SLC10A7Q0GE19 358 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZNF805Q5CZA5 627 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CFAP58Q5T655 872 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CCDC181Q5TID7 509 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KAZNQ674X7 775 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 GDPD4Q6W3E5 623 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SRLQ86TD4 932 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ALYREFQ86V81 257 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SLC41A1Q8IVJ1 513 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RGL4Q8IZJ4 473 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TSEN2Q8NCE0 465 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CCNYQ8ND76 341 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SNX19Q92543 992 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PIGKQ92643 395 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RAB7BQ96AH8 199 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ATP13A3Q9H7F0 1226 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DKK3Q9UBP4 350 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 AMACRQ9UHK6 382 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 EFR3BQ9Y2G0 817 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 USP34Q70CQ2 3546 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FAM47DPA6NHR8 397 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MAP3K6O95382 1288 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FTCDO95954 541 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PEX11BO96011 259 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ITPKAP23677 461 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SERPINA4P29622 427 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CCR5P51681 352 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SUOXP51687 545 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 METAP1P53582 386 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CSRP2Q16527 193 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DCAF12L1Q5VU92 463 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PEAR1Q5VY43 1037 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KIAA0895LQ68EN5 471 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NEK5Q6P3R8 708 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NCEH1Q6PIU2 408 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 BBS12Q6ZW61 710 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PARS2Q7L3T8 475 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DEFB119Q8N690 84 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PAF1Q8N7H5 531 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TRIM58Q8NG06 486 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HCAR2Q8TDS4 363 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DNASE2BQ8WZ79 361 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MAML1Q92585 1016 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZNF641Q96N77 438 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KLHL32Q96NJ5 620 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 OLFM3Q96PB7 478 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MGME1Q9BQP7 344 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 OSBPL8Q9BZF1 889 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 POLR1EQ9GZS1 481 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 C6orf106Q9H6K1 298 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 LZTFL1Q9NQ48 299 aa12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3DA0A087WVF3 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3IA0A087WXS9 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3EA0A087X179 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3KA0A087X1G2 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 GOLGA6L9A6NEM1 432 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3FA6NER0 549 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3LB9A6J9 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 APOC4-APOC2K7ER74 178 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PLK4O00444 970 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZSCAN12O43309 604 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 AP1G1O43747 822 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 FSBPO95073 299 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 APOC2P02655 101 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3HP0C7X1 549 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 KRT10P13645 584 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ADRB3P13945 408 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 XPAP23025 273 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CES1P23141 567 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 GKP32189 559 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PEX5P50542 639 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SCNN1BP51168 640 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SLC10A2Q12908 348 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PLA2G2CQ5R387 149 aa12.86□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TBC1D3GQ6DHY5 549 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms