RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ADGRF4Q8IZF3 695 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 CERS5Q8N5B7 392 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 SPATA5Q8NB90 893 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 SLC44A5Q8NCS7 719 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 ZNF548Q8NEK5 533 aaPredicted RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 CDCA5Q96FF9 252 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 ABHD14AQ9BUJ0 271 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 DEFB129Q9H1M3 183 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 VEZTQ9HBM0 779 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 CNTN6Q9UQ52 1028 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 SPEF2Q9C093 1822 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 CNTNAP1P78357 1384 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 SLC38A8A6NNN8 435 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 KIF28PB7ZC32 967 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 UGDHO60701 494 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 TNFRSF6BO95407 300 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 NTN1O95631 604 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 BAG3O95817 575 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 WNT1P04628 370 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 TNFRSF1BP20333 461 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 ADORA1P30542 326 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 AKT1P31749 480 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 GRK5P34947 590 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 SERPINF1P36955 418 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 FOXG1P55316 489 aaPredicted RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 POLE2P56282 527 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 FAM3BP58499 235 aaPredicted RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 GALNT1Q10472 559 aaPredicted RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 SF3A3Q12874 501 aaKnown RBP eCLIP4.44□□□□□ -1.7
NUP88-202ENST00000570937 MAPK7Q13164 816 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 ZNF260Q3ZCT1 412 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 KIAA1755Q5JYT7 1200 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 FKBP1CQ5VVH2 108 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 ISM2Q6H9L7 571 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 AACSQ86V21 672 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 PIM3Q86V86 326 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 CERS3Q8IU89 383 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 SAMD3Q8N6K7 520 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 OR1N1Q8NGS0 311 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 ATP2A3Q93084 1043 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 MSI2Q96DH6 328 aaKnown RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 ZBED3Q96IU2 234 aaPredicted RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 CLMNQ96JQ2 1002 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 CAPNS2Q96L46 248 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 PRMT6Q96LA8 375 aaPredicted RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 NPAS1Q99742 590 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 HTATIP2Q9BUP3 242 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 MECRQ9BV79 373 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 LRRCC1Q9C099 1032 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 CCDC134Q9H6E4 229 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 TDRD3Q9H7E2 651 aaKnown RBP4.44□□□□□ -1.7
NUP88-202ENST00000570937 TXNRD2Q9NNW7 524 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 RAI14Q9P0K7 980 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 PCDHA12Q9UN75 941 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 SLC12A4Q9UP95 1085 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 EXOC6BQ9Y2D4 811 aa4.44□□□□□ -1.7
NUP88-202ENST00000570937 COL1A1P02452 1464 aaPredicted RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 CLRN2A0PK11 232 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 MYMKA6NI61 221 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 TCP10L2B9ZVM9 353 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 ATG13O75143 517 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 TOMM40O96008 361 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 ITGA2BP08514 1039 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 ALDOCP09972 364 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 PSG1P11464 419 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 SHC2P98077 582 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 MECOMQ03112 1051 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 ZNF569Q5MCW4 686 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 C20orf194Q5TEA3 1177 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 NAA16Q6N069 864 aaPredicted RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 APOBEC3HQ6NTF7 200 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 RGMBQ6NW40 437 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 LRIG3Q6UXM1 1119 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 NOL8Q76FK4 1167 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 WDR83Q9BRX9 315 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 RWDD1Q9H446 243 aaPredicted RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 PLCB1Q9NQ66 1216 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 THSD1Q9NS62 852 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 LIN7CQ9NUP9 197 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 MSRB1Q9NZV6 116 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 HMG20BQ9P0W2 317 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 HERC5Q9UII4 1024 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 DBNLQ9UJU6 430 aaKnown RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 RAB21Q9UL25 225 aa4.43□□□□□ -1.7
NUP88-202ENST00000570937 ASTN2O75129 1339 aaPredicted RBP4.43□□□□□ -1.7
NUP88-202ENST00000570937 ADAMTSL1Q8N6G6 1762 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 SCN9AQ15858 1988 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3DA0A087WVF3 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3IA0A087WXS9 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3EA0A087X179 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3KA0A087X1G2 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 GPR75-ASB3A0A0A6YYF3 556 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 IGLV5-39A0A0G2JS06 123 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3BA6NDS4 549 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A10PA6NDY2 464 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3FA6NER0 549 aaPredicted RBP4.42□□□□□ -1.7
NUP88-202ENST00000570937 EFCAB8A8MWE9 144 aa4.42□□□□□ -1.7
NUP88-202ENST00000570937 TBC1D3LB9A6J9 549 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms