RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 INSIG1O15503 277 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 SPINT1O43278 529 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 AP1G1O43747 822 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 SH3BP5O60239 455 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 PCDH8O95206 1070 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 PRLRP16471 622 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 PMLP29590 882 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 SSR1P43307 286 aaKnown RBP13.21□□□□□ -0.29
CNOT1-220ENST00000569916 CCT8P50990 548 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 ARSEP51690 589 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 CDH6P55285 790 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 NXPH1P58417 271 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 TAS2R40P59535 323 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 IL10RBQ08334 325 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 HADHQ16836 314 aaKnown RBP13.21□□□□□ -0.29
CNOT1-220ENST00000569916 SLC45A4Q5BKX6 768 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 GDPD4Q6W3E5 623 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 DBX2Q6ZNG2 339 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 TC2NQ8N9U0 490 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 MFSD2AQ8NA29 543 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 TMEM145Q8NBT3 493 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 KLK6Q92876 244 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 SKA1Q96BD8 255 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 CAMK1GQ96NX5 476 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 SP110Q9HB58 689 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 GGT7Q9UJ14 662 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 ITM2BQ9Y287 266 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 CA5BQ9Y2D0 317 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 PCDHGB2Q9Y5G2 931 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 COL5A1P20908 1838 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-220ENST00000569916 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 PCNX2A6NKB5 2137 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 SLC31A1O15431 190 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 CD48P09326 243 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 IL4RP24394 825 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 MAN1A1P33908 653 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 GJC1P36383 396 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 RGRP47804 291 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 ZNF75DP51815 510 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 FAM193AP78312 1265 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 RAD51Q06609 339 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 FGL2Q14314 439 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 KRT81Q14533 505 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 KIAA1161Q6NSJ0 714 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 IQCHQ86VS3 1027 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 BAHD1Q8TBE0 780 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-220ENST00000569916 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 MYOCQ99972 504 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 CPEB1Q9BZB8 566 aaKnown RBP13.2□□□□□ -0.3
CNOT1-220ENST00000569916 FZD3Q9NPG1 666 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
CNOT1-220ENST00000569916 IPO11Q9UI26 975 aaKnown RBP13.2□□□□□ -0.3
CNOT1-220ENST00000569916 LCMT1Q9UIC8 334 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 PCOLCE2Q9UKZ9 415 aa13.2□□□□□ -0.3
CNOT1-220ENST00000569916 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 TLR4O00206 839 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 AREL1O15033 823 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 FLRT2O43155 660 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 DFNA5O60443 496 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 PALMO75781 387 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 MTA2O94776 668 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 PIGNO95427 931 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 PEX11BO96011 259 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 HNRNPA2B1P22626 353 aaKnown RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 SERPINB6P35237 376 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 RPS21P63220 83 aaKnown RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 IL9RQ01113 521 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 OVGP1Q12889 678 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 HNRNPDQ14103 355 aaKnown RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 DPYSL3Q14195 570 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 STAT4Q14765 748 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 SHBQ15464 509 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 LRRC73Q5JTD7 316 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 SPATS2Q86XZ4 545 aaKnown RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 TSEN2Q8NCE0 465 aaKnown RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 SLC35G2Q8TBE7 412 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 ZNF599Q96NL3 588 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 CINPQ9BW66 212 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-220ENST00000569916 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 BTBD3Q9Y2F9 522 aa13.19□□□□□ -0.3
CNOT1-220ENST00000569916 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
CNOT1-220ENST00000569916 MUSKO15146 869 aa13.18□□□□□ -0.3
CNOT1-220ENST00000569916 TSPAN6O43657 245 aa13.18□□□□□ -0.3
CNOT1-220ENST00000569916 MFSD11O43934 449 aa13.18□□□□□ -0.3
CNOT1-220ENST00000569916 MAFKO60675 156 aa13.18□□□□□ -0.3
CNOT1-220ENST00000569916 AKT2P31751 481 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms