RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 DMGDHQ9UI17 866 aaKnown RBP12.48□□□□□ -0.41
NUP93-220ENST00000569842 SNX24Q9Y343 169 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 FARP1Q9Y4F1 1045 aaPredicted RBP12.48□□□□□ -0.41
NUP93-220ENST00000569842 TARSL2A2RTX5 802 aaKnown RBP12.48□□□□□ -0.41
NUP93-220ENST00000569842 SYNCRIPO60506 623 aaKnown RBP12.48□□□□□ -0.41
NUP93-220ENST00000569842 PMPCBO75439 489 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 POP4O95707 220 aaKnown RBP12.48□□□□□ -0.41
NUP93-220ENST00000569842 SERPINF2P08697 491 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 IVDP26440 423 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 AP1S1P61966 158 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 SYNPOQ8N3V7 929 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 LRRC45Q96CN5 670 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 HEPHQ9BQS7 1158 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 MLPHQ9BV36 600 aaPredicted RBP12.48□□□□□ -0.41
NUP93-220ENST00000569842 RAB17Q9H0T7 212 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 MFSD1Q9H3U5 465 aa12.48□□□□□ -0.41
NUP93-220ENST00000569842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 E7EVH7 732 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 ANXA9O76027 345 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 HOXB2P14652 356 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 MAPK8P45983 427 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 RPL21P46778 160 aaKnown RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 GUCY2DQ02846 1103 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 SEMA5AQ13591 1074 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 RALGPS1Q5JS13 557 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 PJA1Q8NG27 643 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 GRIN3AQ8TCU5 1115 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
NUP93-220ENST00000569842 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 PIGNO95427 931 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 PDGFBP01127 241 aaPredicted RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 APRTP07741 180 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 GEMP55040 296 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 RAD51Q06609 339 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 STARD3Q14849 445 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 TRADDQ15628 312 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 PCSK7Q16549 785 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 HSF5Q4G112 596 aaPredicted RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 EOGTQ5NDL2 527 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 KIAA1211LQ6NV74 962 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 TRIM67Q6ZTA4 783 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 KDELC2Q7Z4H8 507 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 CAMK1DQ8IU85 385 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 OR8D1Q8WZ84 308 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 VOPP1Q96AW1 172 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 TADA1Q96BN2 335 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 FAM129BQ96TA1 746 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 IL36AQ9UHA7 158 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 CTSLP07711 333 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 LMAN1P49257 510 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 BCL2L1Q07817 233 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 MPP3Q13368 585 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 CAMK2GQ13555 558 aaPredicted RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 IZUMO3Q5VZ72 239 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 IPMKQ8NFU5 416 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 CPT1BQ92523 772 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 SNF8Q96H20 258 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 PPP1R2P1Q96PQ5 205 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 CPEB1Q9BZB8 566 aaKnown RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 OSBPL6Q9BZF3 934 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 ATP13A3Q9H7F0 1226 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 EPB41L5Q9HCM4 733 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
NUP93-220ENST00000569842 MMP17Q9ULZ9 603 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
NUP93-220ENST00000569842 MUC3AQ02505 3323 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.46□□□□□ -0.41
NUP93-220ENST00000569842 A0A1W2PQF6 199 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 GOLGA6CA6NDK9 693 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 GOLGA6BA6NDN3 693 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 DNALI1O14645 258 aaPredicted RBP12.46□□□□□ -0.41
NUP93-220ENST00000569842 LEFTY1O75610 366 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 GOLGA6DP0CG33 693 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 COL9A1P20849 921 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 WNT3AP56704 352 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 TUBB4BP68371 445 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 OLIG2Q13516 323 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 GAS6Q14393 721 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 KDELC1Q6UW63 502 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 PDCD6IPQ8WUM4 868 aaKnown RBP12.46□□□□□ -0.41
NUP93-220ENST00000569842 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 EPC1Q9H2F5 836 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 GOLGA6AQ9NYA3 693 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 RAI2Q9Y5P3 530 aa12.46□□□□□ -0.41
NUP93-220ENST00000569842 TCRBV7S3A2A0A539 114 aa12.46□□□□□ -0.42
NUP93-220ENST00000569842 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms