RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PRR23BQ6ZRT6 265 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ARPINQ7Z6K5 226 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ZC3HC1Q86WB0 502 aaKnown RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 DCP1BQ8IZD4 617 aaKnown RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 DSELQ8IZU8 1212 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ZNF781Q8N8C0 355 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 TNIP2Q8NFZ5 429 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 FAM45AQ8TCE6 357 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 MIPOL1Q8TD10 442 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ELMO2Q96JJ3 720 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 C1orf74Q96LT6 269 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ZMAT2Q96NC0 199 aaKnown RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 LENG8Q96PV6 779 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 CYP2S1Q96SQ9 504 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 CDK5RAP1Q96SZ6 601 aaKnown RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 OSMRQ99650 979 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ULBP1Q9BZM6 244 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 TKTL2Q9H0I9 626 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 DPEP3Q9H4B8 488 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 FBXO44Q9H4M3 255 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ZNF696Q9H7X3 374 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 UGT1A7Q9HAW7 530 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 UGT1A10Q9HAW8 530 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 UGT1A8Q9HAW9 530 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 PLAC1Q9HBJ0 212 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 SYTL2Q9HCH5 934 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 ZBTB26Q9HCK0 441 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 CSNK1G1Q9HCP0 422 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 TXNRD2Q9NNW7 524 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 SPAG4Q9NPE6 437 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 PIGVQ9NUD9 493 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 COMMD8Q9NX08 183 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 TUBA8Q9NY65 449 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 CIDEBQ9UHD4 219 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 PTBP2Q9UKA9 531 aaKnown RBP7.72□□□□□ -1.17
ATXN3-250ENST00000568290 DMTF1Q9Y222 760 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 AP3M1Q9Y2T2 418 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 NDUFAF1Q9Y375 327 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 TCAF1Q9Y4C2 921 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 IPPQ9Y573 584 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 PLXNA1Q9UIW2 1896 aa7.72□□□□□ -1.17
ATXN3-250ENST00000568290 CITO14578 2027 aa7.71□□□□□ -1.17
ATXN3-250ENST00000568290 SYNJ2BP-COX16A0A087WUM0 186 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SYCE1LA8MT33 242 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 KCNK1O00180 336 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 ZNF195O14628 629 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SLC7A4O43246 635 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 HNRNPRO43390 633 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 BUD23O43709 281 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 DNAJA2O60884 412 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 GMNNO75496 209 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 LYPLA1O75608 230 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SRP72O76094 671 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 IPO13O94829 963 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 TMCC1O94876 653 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 MAP3K6O95382 1288 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NPPAP01160 153 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 JCHAINP01591 159 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 CYP11A1P05108 521 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 UBTFL6P0CB48 400 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SMPD1P17405 629 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 PSMC3P17980 439 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 TYMPP19971 482 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 HOXC13P31276 330 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 GRIA1P42261 906 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NAGLUP54802 743 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NRLP54845 237 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 TUBA4AP68366 448 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SMARCB1Q12824 385 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 TRIM32Q13049 653 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 TRIM25Q14258 630 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NFE2Q16621 373 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 LSM12Q3MHD2 195 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 ARL13AQ5H913 290 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NAIF1Q69YI7 327 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 KRT80Q6KB66 452 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 RWDD4Q6NW29 188 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NEPROQ6NW34 567 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 FRMD7Q6ZUT3 714 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 GPR142Q7Z601 462 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 SNX32Q86XE0 403 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 CROCCP3Q8IVE0 287 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 NUP93Q8N1F7 819 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 AADATQ8N5Z0 425 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 ATP6V0D2Q8N8Y2 350 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 LEMD2Q8NC56 503 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 C2CD4AQ8NCU7 369 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 HM13Q8TCT9 377 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 PYDC1Q8WXC3 89 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 RSPH1Q8WYR4 309 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 EME1Q96AY2 570 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 CCDC124Q96CT7 223 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 DUS3LQ96G46 650 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 MAELQ96JY0 434 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 PPP1R10Q96QC0 940 aaKnown RBP7.71□□□□□ -1.18
ATXN3-250ENST00000568290 PPP1R16BQ96T49 567 aa7.71□□□□□ -1.18
ATXN3-250ENST00000568290 CDRT15Q96T59 188 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms