RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 OTUD7AQ8TE49 926 aaPredicted RBP2.36□□□□□ -2.03
SMG1-212ENST00000566328 ATOH1Q92858 354 aaPredicted RBP2.36□□□□□ -2.03
SMG1-212ENST00000566328 TIFAQ96CG3 184 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 OR6C3Q9NZP0 311 aa2.36□□□□□ -2.03
SMG1-212ENST00000566328 LILRA5A6NI73 299 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 FAM157AC9JC47 383 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 SYN3O14994 580 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 ATF3P18847 181 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 PPIGQ13427 754 aaKnown RBP eCLIP2.35□□□□□ -2.03
SMG1-212ENST00000566328 LPIN1Q14693 890 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 TBC1D9BQ66K14 1250 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 CCDC129Q6ZRS4 1044 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 C14orf80Q86SX3 495 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 MB21D2Q8IYB1 491 aaPredicted RBP2.35□□□□□ -2.03
SMG1-212ENST00000566328 CCDC105Q8IYK2 499 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 KBTBD3Q8NAB2 608 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 ZNF248Q8NDW4 579 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 CADM4Q8NFZ8 388 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 IPO4Q8TEX9 1081 aaKnown RBP2.35□□□□□ -2.03
SMG1-212ENST00000566328 ARRDC3Q96B67 414 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 ZNF501Q96CX3 271 aaPredicted RBP2.35□□□□□ -2.03
SMG1-212ENST00000566328 C3orf30Q96M34 536 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 BRD8Q9H0E9 1235 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 MVB12BQ9H7P6 319 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 PTPRHQ9HD43 1115 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 ABCF3Q9NUQ8 709 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 TMLHEQ9NVH6 421 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 UPB1Q9UBR1 384 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 KLQ9UEF7 1012 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 SLCO3A1Q9UIG8 710 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 POU2F3Q9UKI9 436 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 CGNL1Q0VF96 1302 aa2.35□□□□□ -2.03
SMG1-212ENST00000566328 NISCHQ9Y2I1 1504 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 IGKV6D-41A0A0C4DH26 115 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 A0A0G2JPF8 293 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 CPED1A4D0V7 1026 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FAM90A18PA6NE21 464 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FAM90A16PA6NEW6 464 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FAM90A9PA6NNJ1 464 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FAM90A5PA8MXJ8 464 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 HNRNPCL3B7ZW38 293 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 ZNF500O60304 480 aaPredicted RBP2.34□□□□□ -2.03
SMG1-212ENST00000566328 PLA2G6O60733 806 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 HNRNPCL1O60812 293 aaKnown RBP2.34□□□□□ -2.03
SMG1-212ENST00000566328 HEXIM1O94992 359 aaKnown RBP2.34□□□□□ -2.03
SMG1-212ENST00000566328 IL1AP01583 271 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 LINC00271P0C7V0 271 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FAM90A15PP0C7V4 464 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FAM90A14PP0C7W9 464 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 HNRNPCL4P0DMR1 293 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 FGF5P12034 268 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 GYS1P13807 737 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 ZNF10P21506 573 aaPredicted RBP2.34□□□□□ -2.03
SMG1-212ENST00000566328 ALDH4A1P30038 563 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 HSPA7P48741 367 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 SREBF2Q12772 1141 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 ZNF155Q12901 538 aaPredicted RBP2.34□□□□□ -2.03
SMG1-212ENST00000566328 CHAF1AQ13111 956 aaPredicted RBP2.34□□□□□ -2.03
SMG1-212ENST00000566328 MPEG1Q2M385 716 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 BTBD16Q32M84 506 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 IRAK1BP1Q5VVH5 260 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 IZUMO3Q5VZ72 239 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 ARHGAP11AQ6P4F7 1023 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 NFRKBQ6P4R8 1299 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 C11orf96Q7Z7L8 435 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 NFE4Q86UQ8 179 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 DENND6AQ8IWF6 608 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 BRSK2Q8IWQ3 736 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 MCPH1Q8NEM0 835 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 ZMIZ2Q8NF64 920 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 CPT1BQ92523 772 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 TANKQ92844 425 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 RNF183Q96D59 192 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 TTC14Q96N46 770 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 F2RL3Q96RI0 385 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 STK33Q9BYT3 514 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 SLC7A10Q9NS82 523 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 SLC39A10Q9ULF5 831 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 LZTS1Q9Y250 596 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 ZNF711Q9Y462 761 aa2.34□□□□□ -2.03
SMG1-212ENST00000566328 TARSL2A2RTX5 802 aaKnown RBP2.33□□□□□ -2.04
SMG1-212ENST00000566328 OR6C68A6NDL8 312 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 NCK2O43639 380 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 ASNA1O43681 348 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 CBX6O95503 412 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 SRCP12931 536 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 FUT6P51993 359 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 SLC20A2Q08357 652 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 CAPSQ13938 189 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 RPS6KA2Q15349 733 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 SAFBQ15424 915 aaKnown RBP eCLIP2.33□□□□□ -2.04
SMG1-212ENST00000566328 OASLQ15646 514 aaKnown RBP2.33□□□□□ -2.04
SMG1-212ENST00000566328 ATP13A5Q4VNC0 1218 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 COBLL1Q53SF7 1204 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 RAB11FIP2Q7L804 512 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 SHFQ7M4L6 423 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 SPAG16Q8N0X2 631 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 OR4N2Q8NGD1 307 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 RASSF8Q8NHQ8 419 aa2.33□□□□□ -2.04
SMG1-212ENST00000566328 MUL1Q969V5 352 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms