RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TKTL2Q9H0I9 626 aa12.98□□□□□ -0.33
RNF40-208ENST00000565995 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.98□□□□□ -0.33
RNF40-208ENST00000565995 PADI4Q9UM07 663 aa12.98□□□□□ -0.33
RNF40-208ENST00000565995 LRRK2Q5S007 2527 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 MUSKO15146 869 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 OR1E1P30953 314 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 CCKBRP32239 447 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 UGT1A5P35504 534 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 CCNHP51946 323 aaPredicted RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 SNX16P57768 344 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 ARF5P84085 180 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 NFATC3Q12968 1075 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 ZSCAN23Q3MJ62 389 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 PRRT3Q5FWE3 981 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 ESRP1Q6NXG1 681 aaKnown RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 CRTC1Q6UUV9 634 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 LRRC31Q6UY01 552 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 PRICKLE2Q7Z3G6 844 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 BNIPLQ7Z465 357 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 PHACTR4Q8IZ21 702 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 RBFAQ8N0V3 343 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 C1orf131Q8NDD1 294 aaKnown RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 LRRC61Q9BV99 259 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 RETREG1Q9H6L5 497 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 APOBEC3BQ9UH17 382 aaKnown RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
RNF40-208ENST00000565995 HEMK1Q9Y5R4 338 aaPredicted RBP12.97□□□□□ -0.33
RNF40-208ENST00000565995 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 AREL1O15033 823 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 ERBB2P04626 1255 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 ANXA6P08133 673 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 LIPCP11150 499 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 KRT10P13645 584 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 TSHRP16473 764 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.33
RNF40-208ENST00000565995 SCNN1AP37088 669 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 ABL2P42684 1182 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 ZNF805Q5CZA5 627 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 COLEC12Q5KU26 742 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 MACC1Q6ZN28 852 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 ATG14Q6ZNE5 492 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 USP53Q70EK8 1073 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 RAB11FIP2Q7L804 512 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 FSTL5Q8N475 847 aaPredicted RBP12.96□□□□□ -0.33
RNF40-208ENST00000565995 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 OR7D4Q8NG98 312 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 OR6C4Q8NGE1 309 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 GPT2Q8TD30 523 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 SHC3Q92529 594 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 ARHGEF26Q96DR7 871 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 HAPLN3Q96S86 360 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 B3GNT4Q9C0J1 378 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.96□□□□□ -0.33
RNF40-208ENST00000565995 MPP6Q9NZW5 540 aa12.96□□□□□ -0.33
RNF40-208ENST00000565995 HECAQ9UBI9 543 aaPredicted RBP12.96□□□□□ -0.33
RNF40-208ENST00000565995 PPARGC1AQ9UBK2 798 aaKnown RBP12.96□□□□□ -0.33
RNF40-208ENST00000565995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.96□□□□□ -0.33
RNF40-208ENST00000565995 BICDL2A1A5D9 508 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 D6RAR5 112 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 IGFALSP35858 605 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 GABRB2P47870 512 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 PEX5P50542 639 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 THOP1P52888 689 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 GNA12Q03113 381 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 C1orf61Q13536 156 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
RNF40-208ENST00000565995 SLC25A52Q3SY17 297 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 PTPN20Q4JDL3 420 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 TFAP2DQ7Z6R9 452 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 B3GNT8Q7Z7M8 397 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 ARL10Q8N8L6 244 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 STRADBQ9C0K7 418 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 ATP13A1Q9HD20 1204 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 GGT7Q9UJ14 662 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 STAP1Q9ULZ2 295 aa12.95□□□□□ -0.34
RNF40-208ENST00000565995 NBPF19A0A087WUL8 3843 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 NBASA2RRP1 2371 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 USP9YO00507 2555 aaPredicted RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 A0A1W2PQM1 296 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 TMEM110-MUSTN1A8MSY1 372 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 ENDOD1O94919 500 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 GSRP00390 522 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 BMP6P22004 513 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 CDH5P33151 784 aaPredicted RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 BLKP51451 505 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 PPARDQ03181 441 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 ZFP36L1Q07352 338 aaKnown RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 ELOCQ15369 112 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 TGIF1Q15583 401 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms