RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CCDC167Q9P0B6 97 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 GNPTGQ9UJJ9 305 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 VPS28Q9UK41 221 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 TRIM13O60858 407 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 USP12O75317 370 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 LSM8O95777 96 aaKnown RBP16.46■□□□□ 0.23
LINC00554-201ENST00000564841 GRIA4P48058 902 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 YBX1P67809 324 aaKnown RBP16.46■□□□□ 0.23
LINC00554-201ENST00000564841 FAM47CQ5HY64 1035 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 LDLRAD1Q5T700 205 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 IL31Q6EBC2 164 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 RPS27LQ71UM5 84 aaKnown RBP16.46■□□□□ 0.23
LINC00554-201ENST00000564841 C12orf29Q8N999 325 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 CPB2Q96IY4 423 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 CNDP1Q96KN2 507 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 TXNDC16Q9P2K2 825 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 KLQ9UEF7 1012 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 A0A096LPK6 155 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 RNF103-CHMP3A0A140T963 221 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 TKTP29401 623 aaKnown RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 GSSP48637 474 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 RPL14P50914 215 aaKnown RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ZBTB8OSQ8IWT0 167 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 TRPC4APQ8TEL6 797 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 RXFP2Q8WXD0 754 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ARNTL2Q8WYA1 636 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ALPK1Q96QP1 1244 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 EPS8L2Q9H6S3 715 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 SYBUQ9NX95 663 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 DNAJC25-GNG10A0A024R161 153 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ZBTB42B2RXF5 422 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ATXN1P54253 815 aaKnown RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 TPTEP56180 551 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 STXBP5Q5T5C0 1151 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 OR9I1Q8NGQ6 314 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ITPKCQ96DU7 683 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 LRCH3Q96II8 777 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 FCRL3Q96P31 734 aaPredicted RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ADPGKQ9BRR6 497 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ATAD3AQ9NVI7 634 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 EGFL7Q9UHF1 273 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 PCDHGC3Q9UN70 934 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 A0A087WZ62 844 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 H0YCG3 227 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 M0QYV0 167 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 APOL1O14791 398 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 NFICP08651 508 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 PDGFRAP16234 1089 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 CCNA2P20248 432 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 AVPR1AP37288 418 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 MERTKQ12866 999 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 DGKDQ16760 1214 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 DUOXA2Q1HG44 320 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ANO4Q32M45 955 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 HMGCLL1Q8TB92 370 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ACMSDQ8TDX5 336 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 OMDQ99983 421 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 FDXACB1Q9BRP7 624 aaPredicted RBP16.45■□□□□ 0.22
LINC00554-201ENST00000564841 ZNF385DQ9H6B1 395 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 FANCEQ9HB96 536 aa16.45■□□□□ 0.22
LINC00554-201ENST00000564841 PSMD11O00231 422 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 MYO1DO94832 1006 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 BCL10O95999 233 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 ATP6V1B2P21281 511 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 EEF1B2P24534 225 aaKnown RBP16.44■□□□□ 0.22
LINC00554-201ENST00000564841 PCYT1AP49585 367 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 KIZQ2M2Z5 673 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 TIGD2Q4W5G0 525 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 C6orf10Q5SRN2 563 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 FSTL4Q6MZW2 842 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 PPP4R4Q6NUP7 873 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 FAM117BQ6P1L5 589 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 TRUB1Q8WWH5 349 aaKnown RBP16.44■□□□□ 0.22
LINC00554-201ENST00000564841 SGF29Q96ES7 293 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 HEXIM2Q96MH2 286 aaKnown RBP16.44■□□□□ 0.22
LINC00554-201ENST00000564841 DOK1Q99704 481 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 MRPL4Q9BYD3 311 aaKnown RBP16.44■□□□□ 0.22
LINC00554-201ENST00000564841 IPO11Q9UI26 975 aaKnown RBP16.44■□□□□ 0.22
LINC00554-201ENST00000564841 ITGB1BP2Q9UKP3 347 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 DOCK3Q8IZD9 2030 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 C9JVG2 144 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 AXIN1O15169 862 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 IQCF3P0C7M6 154 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 ELK4P28324 431 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 ASPAP45381 313 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 CCNA1P78396 465 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 TSPY1Q01534 308 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 TFDP2Q14188 446 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 MAPK11Q15759 364 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 PPP1R3AQ16821 1122 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 SLFN12LQ6IEE8 588 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 CCNYL1Q8N7R7 359 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 CDKL2Q92772 493 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 LRRC39Q96DD0 335 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 SMARCAD1Q9H4L7 1026 aa16.44■□□□□ 0.22
LINC00554-201ENST00000564841 DNMT3BQ9UBC3 853 aaKnown RBP16.44■□□□□ 0.22
LINC00554-201ENST00000564841 CDYLQ9Y232 598 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms