RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 GBF1Q92538 1859 aa25.5■■□□□ 1.67
LINC01003-201ENST00000564834 CCDC78A2IDD5 438 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 ATXN1LP0C7T5 689 aaKnown RBP25.49■■□□□ 1.67
LINC01003-201ENST00000564834 HLA-DPA1P20036 260 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 CRHR1P34998 444 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 PDE1BQ01064 536 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 MSLNQ13421 630 aaPredicted RBP25.49■■□□□ 1.67
LINC01003-201ENST00000564834 SEPT6Q14141 434 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 KIAA0930Q6ICG6 404 aaPredicted RBP25.49■■□□□ 1.67
LINC01003-201ENST00000564834 ESRP1Q6NXG1 681 aaKnown RBP25.49■■□□□ 1.67
LINC01003-201ENST00000564834 MICALCLQ6ZW33 695 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 CNTN4Q8IWV2 1026 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 ISL2Q96A47 359 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 SLC46A2Q9BY10 475 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 SLC13A1Q9BZW2 595 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 HCFC1R1Q9NWW0 138 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 PDE4DIPQ5VU43 2346 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 TPP1O14773 563 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 GJB3O75712 270 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 HOXA9P31269 272 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 CCR2P41597 374 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 ARCN1P48444 511 aaKnown RBP25.49■■□□□ 1.67
LINC01003-201ENST00000564834 CDK18Q07002 472 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 CDH18Q13634 790 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 ZKSCAN8Q15776 578 aaPredicted RBP25.49■■□□□ 1.67
LINC01003-201ENST00000564834 FSCBQ5H9T9 825 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 SIRPB2Q5JXA9 342 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 SPRED2Q7Z698 418 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 IFT43Q96FT9 208 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 MCMBPQ9BTE3 642 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 HTATIP2Q9BUP3 242 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 ARHGAP26Q9UNA1 814 aa25.49■■□□□ 1.67
LINC01003-201ENST00000564834 NOTCH4Q99466 2003 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 TIMM44O43615 452 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 RFPL2O75678 378 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 FGF1P05230 155 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 DDX6P26196 483 aaKnown RBP eCLIP25.48■■□□□ 1.67
LINC01003-201ENST00000564834 ARNTP27540 789 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 IRS1P35568 1242 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 ARF5P84085 180 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 CAMK1Q14012 370 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 MPP7Q5T2T1 576 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 TDRD5Q8NAT2 981 aaKnown RBP25.48■■□□□ 1.67
LINC01003-201ENST00000564834 TTC16Q8NEE8 873 aa25.48■■□□□ 1.67
LINC01003-201ENST00000564834 ELAC2Q9BQ52 826 aaKnown RBP25.48■■□□□ 1.67
LINC01003-201ENST00000564834 GRM6O15303 877 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 SNX3O60493 162 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 ARHGEF15O94989 841 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 VAPBO95292 243 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 PAPSS2O95340 614 aaPredicted RBP25.47■■□□□ 1.67
LINC01003-201ENST00000564834 PTPN2P17706 415 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 CR2P20023 1033 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 CES1P23141 567 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 CNGA3Q16281 694 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 FSTL4Q6MZW2 842 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 BBS7Q8IWZ6 715 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 CCDC197Q8NCU1 140 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 SHKBP1Q8TBC3 707 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 FEM1AQ9BSK4 669 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 SLC2A6Q9UGQ3 507 aa25.47■■□□□ 1.67
LINC01003-201ENST00000564834 GOLGA8TH3BQL2 631 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 LEFTY2O00292 366 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 ZMPSTE24O75844 475 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 MYOGP15173 224 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 MZF1P28698 734 aaPredicted RBP25.46■■□□□ 1.67
LINC01003-201ENST00000564834 MAGEA12P43365 314 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 CYTH1Q15438 398 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 TSTD2Q5T7W7 516 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 DCLK2Q8N568 766 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 ANKS4BQ8N8V4 417 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 ZNF75CPQ92670 426 aaPredicted RBP25.46■■□□□ 1.67
LINC01003-201ENST00000564834 ATP2A3Q93084 1043 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 GRAMD1AQ96CP6 724 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 CABS1Q96KC9 395 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 PITPNM3Q9BZ71 974 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 VPS28Q9UK41 221 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 OR51B4Q9Y5P0 310 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 INSIG1O15503 277 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 SIN3BO75182 1162 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 RGRP47804 291 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 SERPINB8P50452 374 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 PDE1CQ14123 709 aaPredicted RBP25.46■■□□□ 1.67
LINC01003-201ENST00000564834 UGP2Q16851 508 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 MPPE1Q53F39 396 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 GPR158Q5T848 1215 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 NLRP9Q7RTR0 991 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 MFN1Q8IWA4 741 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 DDI1Q8WTU0 396 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 SPOCK2Q92563 424 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 NOD2Q9HC29 1040 aa25.46■■□□□ 1.67
LINC01003-201ENST00000564834 ATXN2Q99700 1313 aaKnown RBP25.45■■□□□ 1.66
LINC01003-201ENST00000564834 MROH6A6NGR9 719 aa25.45■■□□□ 1.66
LINC01003-201ENST00000564834 SNAP91O60641 907 aa25.45■■□□□ 1.66
LINC01003-201ENST00000564834 HNRNPA1P09651 372 aaKnown RBP eCLIP25.45■■□□□ 1.66
LINC01003-201ENST00000564834 TYK2P29597 1187 aa25.45■■□□□ 1.66
LINC01003-201ENST00000564834 SERPINB4P48594 390 aa25.45■■□□□ 1.66
LINC01003-201ENST00000564834 ITIH4Q14624 930 aa25.45■■□□□ 1.66
LINC01003-201ENST00000564834 INO80DQ53TQ3 878 aaPredicted RBP25.45■■□□□ 1.66
LINC01003-201ENST00000564834 C6orf89Q6UWU4 347 aa25.45■■□□□ 1.66
LINC01003-201ENST00000564834 DCAF4L2Q8NA75 395 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms