RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 DLG2Q15700 870 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 PCSK7Q16549 785 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 PTPRNQ16849 979 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 CARD16Q5EG05 197 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 ATXN7L2Q5T6C5 722 aaPredicted RBP12.97□□□□□ -0.33
CLK3-214ENST00000564096 ARMC3Q5W041 872 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 KCTD11Q693B1 232 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 LRRC8BQ6P9F7 803 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 Q6ZVU0 165 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 SRLQ86TD4 932 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 KCNV2Q8TDN2 545 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 AENQ8WTP8 325 aaKnown RBP12.97□□□□□ -0.33
CLK3-214ENST00000564096 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
CLK3-214ENST00000564096 ATXN2LQ8WWM7 1075 aaKnown RBP12.97□□□□□ -0.33
CLK3-214ENST00000564096 SORCS1Q8WY21 1168 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 LRRC39Q96DD0 335 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 CHFRQ96EP1 664 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 MRGPRX3Q96LB0 322 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 TDRD1Q9BXT4 1180 aaKnown RBP12.97□□□□□ -0.33
CLK3-214ENST00000564096 ADGRE3Q9BY15 652 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 TNKS2Q9H2K2 1166 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 HEBP1Q9NRV9 189 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 UBP1Q9NZI7 540 aa12.97□□□□□ -0.33
CLK3-214ENST00000564096 COL4A2P08572 1712 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 TCRBV7S3A2A0A539 114 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 BNIP3LO60238 219 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 CPP00450 1065 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 EPOP01588 193 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 FGF1P05230 155 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 H2AFXP16104 143 aaPredicted RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 NFKBIAP25963 317 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 RGRP47804 291 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 CCNHP51946 323 aaPredicted RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 CDK18Q07002 472 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 ZNF234Q14588 700 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 MLF2Q15773 248 aaPredicted RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 FBXO43Q4G163 708 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 NCEH1Q6PIU2 408 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 KDELC1Q6UW63 502 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 PRPF39Q86UA1 669 aaKnown RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 RNF135Q8IUD6 432 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 TADA1Q96BN2 335 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 MYO19Q96H55 970 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 LRIG1Q96JA1 1093 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 MRGPRX2Q96LB1 330 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 TTC25Q96NG3 672 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 OSBPL1AQ9BXW6 950 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 ZDHHC6Q9H6R6 413 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 BFARQ9NZS9 450 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 SAMD15Q9P1V8 674 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 THAP10Q9P2Z0 257 aaPredicted RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 HECAQ9UBI9 543 aaPredicted RBP12.96□□□□□ -0.33
CLK3-214ENST00000564096 STARD13Q9Y3M8 1113 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 RAI2Q9Y5P3 530 aa12.96□□□□□ -0.33
CLK3-214ENST00000564096 SHROOM3Q8TF72 1996 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 TTC34A8MYJ7 566 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 ALOX15BO15296 676 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 TP73O15350 636 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 MMP2P08253 660 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 GALK1P51570 392 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 EPHB1P54762 984 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 RPL26P61254 145 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 PRKCQQ04759 706 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 PDIA2Q13087 525 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 LAMB3Q13751 1172 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 SPARCL1Q14515 664 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 STARD3Q14849 445 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 PON2Q15165 354 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 BBS9Q3SYG4 887 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 DGKKQ5KSL6 1271 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 ARMC12Q5T9G4 340 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 NAIF1Q69YI7 327 aaPredicted RBP12.95□□□□□ -0.34
CLK3-214ENST00000564096 SDE2Q6IQ49 451 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 TMC3Q7Z5M5 1100 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 RELL1Q8IUW5 271 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 UBALD2Q8IYN6 164 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 ZBED8Q8IZ13 594 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
CLK3-214ENST00000564096 NDUFAF2Q8N183 169 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms