RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 PCDHB9Q9Y5E1 797 aa31.18■■■□□ 2.58
CMTM4-204ENST00000563952 FADS3Q9Y5Q0 445 aa31.18■■■□□ 2.58
CMTM4-204ENST00000563952 TLR4O00206 839 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 CCT8P50990 548 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 FAM193AP78312 1265 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 HADHQ16836 314 aaKnown RBP31.17■■■□□ 2.58
CMTM4-204ENST00000563952 TMCO3Q6UWJ1 677 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 ARHGAP36Q6ZRI8 547 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 CPNE8Q86YQ8 564 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 MFSD2AQ8NA29 543 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 VOPP1Q96AW1 172 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 FZD3Q9NPG1 666 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 ETNK2Q9NVF9 386 aa31.17■■■□□ 2.58
CMTM4-204ENST00000563952 KNL1Q8NG31 2342 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 INSIG1O15503 277 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 PALMO75781 387 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 TMEM253P0C7T8 217 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 ABL2P42684 1182 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 TBX2Q13207 712 aaPredicted RBP31.16■■■□□ 2.58
CMTM4-204ENST00000563952 TP53INP2Q8IXH6 220 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 LZTR1Q8N653 840 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 GDF3Q9NR23 364 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 PCDHGB2Q9Y5G2 931 aa31.16■■■□□ 2.58
CMTM4-204ENST00000563952 TMEM110-MUSTN1A8MSY1 372 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 NEMP1O14524 444 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 PROSCO94903 275 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 PMLP29590 882 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 CDH6P55285 790 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 NXPH1P58417 271 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 HNRNPDQ14103 355 aaKnown RBP31.15■■■□□ 2.58
CMTM4-204ENST00000563952 SUZ12Q15022 739 aaKnown RBP31.15■■■□□ 2.58
CMTM4-204ENST00000563952 KIAA1161Q6NSJ0 714 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 RAB7BQ96AH8 199 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 FEM1CQ96JP0 617 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 ELF4Q99607 663 aaPredicted RBP31.15■■■□□ 2.58
CMTM4-204ENST00000563952 ITM2BQ9Y287 266 aa31.15■■■□□ 2.58
CMTM4-204ENST00000563952 PCNX2A6NKB5 2137 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 AP1G1O43747 822 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 DFNA5O60443 496 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 AKT2P31751 481 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 RPS21P63220 83 aaKnown RBP31.14■■■□□ 2.58
CMTM4-204ENST00000563952 FOXC1Q12948 553 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 TRIP6Q15654 476 aaKnown RBP31.14■■■□□ 2.58
CMTM4-204ENST00000563952 TMEM259Q4ZIN3 620 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 LRRC73Q5JTD7 316 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 CINPQ9BW66 212 aaPredicted RBP31.14■■■□□ 2.58
CMTM4-204ENST00000563952 RBSNQ9H1K0 784 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 IPO11Q9UI26 975 aaKnown RBP31.14■■■□□ 2.58
CMTM4-204ENST00000563952 GGT7Q9UJ14 662 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 PCOLCE2Q9UKZ9 415 aa31.14■■■□□ 2.58
CMTM4-204ENST00000563952 A0A1B0GTQ1 180 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 FLRT2O43155 660 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 PIGNO95427 931 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 IL10RBQ08334 325 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 TTC7BQ86TV6 843 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 IQCHQ86VS3 1027 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 TSC1Q92574 1164 aa31.13■■■□□ 2.57
CMTM4-204ENST00000563952 TRPM6Q9BX84 2022 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 TSPAN6O43657 245 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 CD48P09326 243 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 HNRNPA2B1P22626 353 aaKnown RBP31.12■■■□□ 2.57
CMTM4-204ENST00000563952 MMRN1Q13201 1228 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 ATP13A4Q4VNC1 1196 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 SPATS2Q86XZ4 545 aaKnown RBP31.12■■■□□ 2.57
CMTM4-204ENST00000563952 TMEM145Q8NBT3 493 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 TSEN2Q8NCE0 465 aaKnown RBP31.12■■■□□ 2.57
CMTM4-204ENST00000563952 RHBDD1Q8TEB9 315 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 KLHDC7BQ96G42 594 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 SLC17A9Q9BYT1 436 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 CPEB1Q9BZB8 566 aaKnown RBP31.12■■■□□ 2.57
CMTM4-204ENST00000563952 KLHL11Q9NVR0 708 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 LCMT1Q9UIC8 334 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 ANGPTL2Q9UKU9 493 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 BTBD3Q9Y2F9 522 aa31.12■■■□□ 2.57
CMTM4-204ENST00000563952 PCDHGA12O60330 932 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 MAGEC1O60732 1142 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 RGRP47804 291 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 CLDN2P57739 230 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 TAS2R40P59535 323 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 OVGP1Q12889 678 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 MESDQ14696 234 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 DBX2Q6ZNG2 339 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 SLC35G2Q8TBE7 412 aa31.11■■■□□ 2.57
CMTM4-204ENST00000563952 IGLON5A6NGN9 336 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 SPINT1O43278 529 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 CBFA2T3O75081 653 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 XPAP23025 273 aaPredicted RBP31.1■■■□□ 2.57
CMTM4-204ENST00000563952 SGCGQ13326 291 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 FGL2Q14314 439 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 RFTN1Q14699 578 aaPredicted RBP31.1■■■□□ 2.57
CMTM4-204ENST00000563952 GRM3Q14832 879 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 SRLQ86TD4 932 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 GATAD2AQ86YP4 633 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 KCTD6Q8NC69 237 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 CALN1Q9BXU9 219 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 RCOR3Q9P2K3 495 aaPredicted RBP31.1■■■□□ 2.57
CMTM4-204ENST00000563952 DKK3Q9UBP4 350 aa31.1■■■□□ 2.57
CMTM4-204ENST00000563952 PAK4O96013 591 aaPredicted RBP31.09■■■□□ 2.57
CMTM4-204ENST00000563952 THEGLP0DJG4 465 aa31.09■■■□□ 2.57
CMTM4-204ENST00000563952 TIMP2P16035 220 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms