RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-206	ENST00000562791	MYOM3	Q5VTT5	1437 aa		4.85	□□□□□ -1.63
CHD9-206	ENST00000562791	NCOA3	Q9Y6Q9	1424 aa		4.85	□□□□□ -1.63
CHD9-206	ENST00000562791	LMTK3	Q96Q04	1460 aa		4.85	□□□□□ -1.63
CHD9-206	ENST00000562791	CCDC171	Q6TFL3	1326 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	LINC00854	A0A1B0GVQ3	168 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ANO9	A1A5B4	782 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	TARSL2	A2RTX5	802 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	GOLGA6L4	A6NEF3	574 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ENO4	A6NNW6	628 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	KIF28P	B7ZC32	967 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	C19orf81	C9J6K1	198 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	LIN7A	O14910	233 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	NEMF	O60524	1076 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	PLA2G6	O60733	806 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	DIAPH2	O60879	1101 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	FER	P16591	822 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	NPPB	P16860	134 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	DES	P17661	470 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	AKT1	P31749	480 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	KIF5B	P33176	963 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	FNTA	P49354	379 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	PEX5	P50542	639 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	UBXN2A	P68543	259 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	NUCB1	Q02818	461 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	TLE3	Q04726	772 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	PPID	Q08752	370 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	DDX10	Q13206	875 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	SNX1	Q13596	522 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CUL4B	Q13620	913 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	UBE4A	Q14139	1066 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	COG2	Q14746	738 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CCDC57	Q2TAC2	916 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	USH1G	Q495M9	461 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ARL13A	Q5H913	290 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ENTPD8	Q5MY95	495 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	TTC39A	Q5SRH9	613 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CFAP58	Q5T655	872 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	IRGC	Q6NXR0	463 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	SLC30A9	Q6PML9	568 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	KDELC2	Q7Z4H8	507 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CTU1	Q7Z7A3	348 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ADHFE1	Q8IWW8	467 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	DCLK2	Q8N568	766 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ADPRHL1	Q8NDY3	354 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	NEK11	Q8NG66	645 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	GSDMB	Q8TAX9	411 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CENPI	Q92674	756 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	GCC1	Q96CN9	775 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	RBM41	Q96IZ5	413 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ADAD1	Q96M93	576 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	FAM167B	Q9BTA0	163 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	STK33	Q9BYT3	514 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	MAGEH1	Q9H213	219 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	SLCO5A1	Q9H2Y9	848 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	SFXN1	Q9H9B4	322 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	KIF9	Q9HAQ2	790 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	TUBGCP4	Q9UGJ1	667 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	PHTF1	Q9UMS5	762 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	PRELID1	Q9Y255	219 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CARD8	Q9Y2G2	431 aa		4.84	□□□□□ -1.63
CHD9-206	ENST00000562791	CUX2	O14529	1486 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	ATXN2	Q99700	1313 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791		A0A1W2PRQ8	180 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791		H0Y3Z8	333 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791		M0QX08	132 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	HNRNPDL	O14979	420 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	RNASEH2A	O75792	299 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	PENK	P01210	267 aa	Predicted RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	TROVE2	P10155	538 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	ABCB4	P21439	1286 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	RFX2	P48378	723 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	IK	Q13123	557 aa	Predicted RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	INA	Q16352	499 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	SMUG1	Q53HV7	270 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	SYCP2L	Q5T4T6	812 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	ARMC3	Q5W041	872 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	THOC7	Q6I9Y2	204 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	RINT1	Q6NUQ1	792 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	CEP57L1	Q8IYX8	460 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	ESX1	Q8N693	406 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	MSANTD4	Q8NCY6	345 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	TRIM58	Q8NG06	486 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	CLEC4C	Q8WTT0	213 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	ZNF75CP	Q92670	426 aa	Predicted RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	NEUROG1	Q92886	237 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	TBC1D31	Q96DN5	1066 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	SLC39A13	Q96H72	371 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	URB1-AS1	Q96HZ7	61 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	REXO5	Q96IC2	774 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	ZMAT2	Q96NC0	199 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	SIN3A	Q96ST3	1273 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	UPF3B	Q9BZI7	483 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	CLIC5	Q9NZA1	410 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	TBK1	Q9UHD2	729 aa		4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	PAIP2B	Q9ULR5	123 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-206	ENST00000562791	SLC12A4	Q9UP95	1085 aa		4.83	□□□□□ -1.64

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