RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 CBX4O00257 560 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 INSIG1O15503 277 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 SNAP91O60641 907 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 CSPG5O95196 566 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ZWINTO95229 277 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ASMTLO95671 621 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 PENKP01210 267 aaPredicted RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 CYBBP04839 570 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 FGF1P05230 155 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ERVK-10P10266 1014 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ALADP13716 330 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 PSMA3P25788 255 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 GP5P40197 560 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 CHRNA4P43681 627 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 RGRP47804 291 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ARCN1P48444 511 aaKnown RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 CSNK1DP48730 415 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 CSE1LP55060 971 aaKnown RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 CDH18Q13634 790 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 LAMB3Q13751 1172 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 POU6F1Q14863 301 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 PCSK7Q16549 785 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 SIRPB2Q5JXA9 342 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 PDPK2PQ6A1A2 396 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 KIAA0930Q6ICG6 404 aaPredicted RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 NLRP9Q7RTR0 991 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 MFN1Q8IWA4 741 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 CNTN4Q8IWV2 1026 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 C4orf33Q8N1A6 199 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 RIN3Q8TB24 985 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ACMSDQ8TDX5 336 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 CKAP2Q8WWK9 683 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 PEX13Q92968 403 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ISL2Q96A47 359 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ABHD8Q96I13 439 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 NSMCE3Q96MG7 304 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ZSWIM3Q96MP5 696 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ZNF778Q96MU6 729 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ZNF317Q96PQ6 595 aaPredicted RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 C2orf49Q9BVC5 232 aaPredicted RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 SMG9Q9H0W8 520 aaKnown RBP9.63□□□□□ -0.87
CDH13-205ENST00000562307 NKX2-4Q9H2Z4 354 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 NKIRAS1Q9NYS0 192 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ZFATQ9P243 1243 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 CHD7Q9P2D1 2997 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 LHX3Q9UBR4 397 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 VPS51Q9UID3 782 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 MSRAQ9UJ68 235 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 VPS28Q9UK41 221 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 ACTL7AQ9Y615 435 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 LAMA2P24043 3122 aaKnown RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 TTC24A2A3L6 582 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 TM9SF1O15321 606 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 SPAG7O75391 227 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 TMCC1O94876 653 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 PRAMEF12O95522 483 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 NDST3O95803 873 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 PRLP01236 227 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 CEBPBP17676 345 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 CA4P22748 312 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 ARNTP27540 789 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 RPA3P35244 121 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 SPRP35270 261 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 NEK3P51956 506 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 SEC24CP53992 1094 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 ACVR1Q04771 509 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 LMAN2Q12907 356 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 PLEKHG6Q3KR16 790 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 HSP90AA5PQ58FG0 334 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 TSTD2Q5T7W7 516 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 ZNF697Q5TEC3 545 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 RETSATQ6NUM9 610 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 NCEH1Q6PIU2 408 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 TMEM184AQ6ZMB5 413 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 KIAA0907Q7Z7F0 614 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 RBM23Q86U06 439 aaKnown RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 KCNMB4Q86W47 210 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 RASSF3Q86WH2 238 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 TMEM25Q86YD3 366 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 ARID3BQ8IVW6 561 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 APCDD1Q8J025 514 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 SLC25A41Q8N5S1 370 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 ZNF557Q8N988 423 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 ANKRD42Q8N9B4 389 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 SMG7Q92540 1137 aaKnown RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 IRF7Q92985 503 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 APOPT1Q96IL0 206 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 PPANQ9NQ55 473 aaKnown RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 C20orf96Q9NUD7 363 aaPredicted RBP9.62□□□□□ -0.87
CDH13-205ENST00000562307 ABCB8Q9NUT2 735 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 DZANK1Q9NVP4 752 aa9.62□□□□□ -0.87
CDH13-205ENST00000562307 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms