RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 IL10RBQ08334 325 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 SLC10A7Q0GE19 358 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 GRIK2Q13002 908 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 PUM1Q14671 1186 aaKnown RBP eCLIP10.26□□□□□ -0.77
HERC1-212ENST00000561348 LBRQ14739 615 aaKnown RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 STAT4Q14765 748 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 INO80DQ53TQ3 878 aaPredicted RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 ZNF805Q5CZA5 627 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 PRAMEF14Q5SWL7 426 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 FAM182AQ5T1J6 154 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 PIP5KL1Q5T9C9 394 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 AGBL4Q5VU57 503 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 SLC23A3Q6PIS1 610 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 B4GALNT4Q76KP1 1039 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 PARS2Q7L3T8 475 aaKnown RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 DGLUCYQ7Z3D6 616 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 SRLQ86TD4 932 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 CAMK1DQ8IU85 385 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 RHOT1Q8IXI2 618 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 MINDY1Q8N5J2 469 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 PCDH19Q8TAB3 1148 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 CASKIN2Q8WXE0 1202 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 DNASE2BQ8WZ79 361 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 NT5MQ9NPB1 228 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 SEPT10Q9P0V9 454 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 LHX3Q9UBR4 397 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 SEPT3Q9UH03 358 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 ITM2BQ9Y287 266 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 ALG6Q9Y672 507 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 DUSP10Q9Y6W6 482 aa10.26□□□□□ -0.77
HERC1-212ENST00000561348 TNRC6BQ9UPQ9 1833 aaKnown RBP10.26□□□□□ -0.77
HERC1-212ENST00000561348 A0A1W2PPC4 97 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 APOL1O14791 398 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SLC7A4O43246 635 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 PLRG1O43660 514 aaKnown RBP10.25□□□□□ -0.77
HERC1-212ENST00000561348 OPHN1O60890 802 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 PTMAP06454 111 aaKnown RBP10.25□□□□□ -0.77
HERC1-212ENST00000561348 SDHBP21912 280 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 IL4RP24394 825 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 ITGB7P26010 798 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 HOXD12P35452 270 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SLC1A1P43005 524 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 RGRP47804 291 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 FAM193AP78312 1265 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 IL9RQ01113 521 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 GBE1Q04446 702 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SGCGQ13326 291 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SETMARQ53H47 684 aaPredicted RBP10.25□□□□□ -0.77
HERC1-212ENST00000561348 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 CCDC181Q5TID7 509 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 MARC1Q5VT66 337 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SEL1L3Q68CR1 1132 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 NCBP2-AS2Q69YL0 99 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 NPNTQ6UXI9 565 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 TSC1Q92574 1164 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 FEM1CQ96JP0 617 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 ZNF670Q9BS34 389 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 OSBPL1AQ9BXW6 950 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 PCED1AQ9H1Q7 454 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 GAREM1Q9H706 876 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 EBF2Q9HAK2 575 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 PDFQ9HBH1 243 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SCUBE2Q9NQ36 999 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 DDX56Q9NY93 547 aaKnown RBP10.25□□□□□ -0.77
HERC1-212ENST00000561348 RCOR3Q9P2K3 495 aaPredicted RBP10.25□□□□□ -0.77
HERC1-212ENST00000561348 TRIM10Q9UDY6 481 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 GGT7Q9UJ14 662 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.25□□□□□ -0.77
HERC1-212ENST00000561348 SNX11Q9Y5W9 270 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 CFAP54Q96N23 3096 aa10.25□□□□□ -0.77
HERC1-212ENST00000561348 DOCK9Q9BZ29 2069 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 PLXNA2O75051 1894 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 IGLON5A6NGN9 336 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SLC30A4O14863 429 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 WNT9AO14904 365 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 MAFKO60675 156 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 MTA2O94776 668 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 LCA5LO95447 670 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 PAK4O96013 591 aaPredicted RBP10.24□□□□□ -0.77
HERC1-212ENST00000561348 KRT10P13645 584 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 CD38P28907 300 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SERPINA4P29622 427 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 ABL2P42684 1182 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 MMP13P45452 471 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 RENBPP51606 427 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 ARSEP51690 589 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 VAV2P52735 878 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 CLDN2P57739 230 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 GSDMDP57764 484 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 TAS2R38P59533 333 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 RACK1P63244 317 aaKnown RBP10.24□□□□□ -0.77
HERC1-212ENST00000561348 BCL2L1Q07817 233 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 AP1B1Q10567 949 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms