RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 USP15Q9Y4E8 981 aaPredicted RBP10.43□□□□□ -0.74
USP3-219ENST00000561326 KIAA1549LQ6ZVL6 1849 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ATG2BQ96BY7 2078 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 LOC285095A0A1B0GVY8 99 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 TLDC2A0PJX2 215 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 GOLGA8KD6RF30 607 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 RASGRF2O14827 1237 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 MUSKO15146 869 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ATP9BO43861 1147 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 TULP3O75386 442 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 BANF1O75531 89 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 TCEA3O75764 348 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 POP4O95707 220 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 NDST3O95803 873 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 CD160O95971 181 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 IGSF6O95976 241 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 MT-CO1P00395 513 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 FGF1P05230 155 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 SRPRAP08240 638 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 CISD3P0C7P0 127 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ALADP13716 330 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PGAM1P18669 254 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 CR2P20023 1033 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 HLA-DPA1P20036 260 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ADRA1DP25100 572 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 SSTR1P30872 391 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 GDI1P31150 447 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 STX2P32856 288 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 RECQLP46063 649 aaPredicted RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 VASPP50552 380 aaPredicted RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 ST8SIA6P61647 398 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 CDK18Q07002 472 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 GRM2Q14416 872 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 SLC1A5Q15758 541 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 KLHL38Q2WGJ6 581 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 KRT71Q3SY84 523 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 FUT11Q495W5 492 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PCID2Q5JVF3 399 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 SPANXN3Q5MJ09 141 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ASTLQ6HA08 431 aaPredicted RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 PARM1Q6UWI2 310 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 CYS1Q717R9 158 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ZNF534Q76KX8 674 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 NLRP9Q7RTR0 991 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 KDELC2Q7Z4H8 507 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ADIPOR2Q86V24 386 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PLPP6Q8IY26 295 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 NDUFAF2Q8N183 169 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PCDH20Q8N6Y1 951 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 PAF1Q8N7H5 531 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PPHLN1Q8NEY8 458 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 UHMK1Q8TAS1 419 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 GSDMBQ8TAX9 411 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 CSGALNACT1Q8TDX6 532 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 UCMAQ8WVF2 138 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 SUSD6Q92537 303 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 NXPE3Q969Y0 559 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 RPL10LQ96L21 214 aaKnown RBP10.42□□□□□ -0.74
USP3-219ENST00000561326 CYTH2Q99418 400 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 APOL2Q9BQE5 337 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 EPB41L4BQ9H329 900 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 CENPHQ9H3R5 247 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 BRD9Q9H8M2 597 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 LHX3Q9UBR4 397 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ERVW-1Q9UQF0 538 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 ACTL7AQ9Y615 435 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 NFS1Q9Y697 457 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 IKBKGQ9Y6K9 419 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 TICRRQ7Z2Z1 1910 aa10.42□□□□□ -0.74
USP3-219ENST00000561326 MYLKQ15746 1914 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 EXOC1LA0A1B0GW35 172 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 H3BQ06 376 aaPredicted RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 AGPSO00116 658 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SOX1O00570 391 aaPredicted RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 GSRP00390 522 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 DLDP09622 509 aaKnown RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 SRCP12931 536 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 TPH1P17752 444 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 KCNA5P22460 613 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 ATP5DP30049 168 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 EIF2DP41214 584 aaKnown RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 GPX6P59796 221 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 ZNF844Q08AG5 666 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SMAD4Q13485 552 aaKnown RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 MTM1Q13496 603 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 EIF4HQ15056 248 aaKnown RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 DLG2Q15700 870 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 CCDC85BQ15834 202 aaPredicted RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 CERCAMQ5T4B2 595 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 LGSNQ5TDP6 509 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 NCEH1Q6PIU2 408 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 CAPN12Q6ZSI9 719 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 IGDCC3Q8IVU1 814 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 ETFBKMTQ8IXQ9 262 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 RYBPQ8N488 228 aaPredicted RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 SH2D3CQ8N5H7 860 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SLC25A41Q8N5S1 370 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms