RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TCEAL2Q9H3H9 227 aaPredicted RBP18.85■□□□□ 0.61
TPM1-226ENST00000560959 ACP6Q9NPH0 428 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 ANLNQ9NQW6 1124 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 SEPT10Q9P0V9 454 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 PTPN13Q12923 2485 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 C16orf96A6NNT2 1141 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 I6L893 689 aaPredicted RBP18.84■□□□□ 0.61
TPM1-226ENST00000560959 NTRK1P04629 796 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 TSHRP16473 764 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 PPARDQ03181 441 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 C1orf61Q13536 156 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 ZNF805Q5CZA5 627 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 FAXCQ5TGI0 409 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 OTUD1Q5VV17 481 aaPredicted RBP18.84■□□□□ 0.61
TPM1-226ENST00000560959 MACC1Q6ZN28 852 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 C1orf131Q8NDD1 294 aaKnown RBP18.84■□□□□ 0.61
TPM1-226ENST00000560959 OR7D4Q8NG98 312 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 SPON2Q9BUD6 331 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 TRIM4Q9C037 500 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 MPP6Q9NZW5 540 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 ZNF212Q9UDV6 495 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 PNMA8BQ9ULN7 279 aaPredicted RBP18.84■□□□□ 0.61
TPM1-226ENST00000560959 STAP1Q9ULZ2 295 aa18.84■□□□□ 0.61
TPM1-226ENST00000560959 D6RAR5 112 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 NEMP1O14524 444 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 CASC3O15234 703 aaKnown RBP18.83■□□□□ 0.6
TPM1-226ENST00000560959 ALPIP09923 528 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 PEX5P50542 639 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 DNA2P51530 1060 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.6
TPM1-226ENST00000560959 ELOCQ15369 112 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 ARTNQ5T4W7 220 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 TFAP2DQ7Z6R9 452 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 B3GNT8Q7Z7M8 397 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 ZSCAN1Q8NBB4 408 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 HAPLN3Q96S86 360 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 B3GNT4Q9C0J1 378 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 RETREG1Q9H6L5 497 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 EPB41L5Q9HCM4 733 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.83■□□□□ 0.6
TPM1-226ENST00000560959 HOOK1Q9UJC3 728 aaKnown RBP18.83■□□□□ 0.6
TPM1-226ENST00000560959 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.83■□□□□ 0.6
TPM1-226ENST00000560959 KIF26BQ2KJY2 2108 aa18.83■□□□□ 0.6
TPM1-226ENST00000560959 BICDL2A1A5D9 508 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 TMEM110-MUSTN1A8MSY1 372 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 BECN2A8MW95 431 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 AREL1O15033 823 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 CD160O95971 181 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 ERBB2P04626 1255 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 EIF4A3P38919 411 aaKnown RBP18.82■□□□□ 0.6
TPM1-226ENST00000560959 ABL2P42684 1182 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 ARF5P84085 180 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 GNA12Q03113 381 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 TGIF1Q15583 401 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 JAMLQ86YT9 394 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 LURAP1LQ8IV03 231 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 OSBPL1AQ9BXW6 950 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 ATP13A1Q9HD20 1204 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 DOLKQ9UPQ8 538 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 AHCTF1Q8WYP5 2266 aa18.82■□□□□ 0.6
TPM1-226ENST00000560959 A0A1W2PQM1 296 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 POP4O95707 220 aaKnown RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 JMJD7P0C870 316 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 CD44P16070 742 aaKnown RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 IGFALSP35858 605 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 SCNN1AP37088 669 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 ETFBP38117 255 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 GEMIN4P57678 1058 aaKnown RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 CCL7P80098 99 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 DEUP1Q05D60 604 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 TBR1Q16650 682 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 ELOA2Q8IYF1 753 aaPredicted RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 TIGD1Q96MW7 591 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 ZYG11BQ9C0D3 744 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 LRRN3Q9H3W5 708 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 ZDHHC6Q9H6R6 413 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 SYNDIG1Q9H7V2 258 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 GEMIN8Q9NWZ8 242 aaKnown RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 PPARGC1AQ9UBK2 798 aaKnown RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 GULP1Q9UBP9 304 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 SEPT3Q9UH03 358 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 RABGEF1Q9UJ41 708 aa18.81■□□□□ 0.6
TPM1-226ENST00000560959 FCF1Q9Y324 198 aaKnown RBP18.81■□□□□ 0.6
TPM1-226ENST00000560959 A0A1W2PQC6 194 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 PPFIA2O75334 1257 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 TM7SF2O76062 418 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 GSRP00390 522 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 FAM87AP0C7U9 286 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 PNLIPP16233 465 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 HK3P52790 923 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 PTK2Q05397 1052 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 ZFP36L1Q07352 338 aaKnown RBP18.8■□□□□ 0.6
TPM1-226ENST00000560959 MORC3Q14149 939 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 SLC25A52Q3SY17 297 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 PTPN20Q4JDL3 420 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 MANEAQ5SRI9 462 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 TRIM65Q6PJ69 517 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 GKN2Q86XP6 184 aa18.8■□□□□ 0.6
TPM1-226ENST00000560959 DTX1Q86Y01 620 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms