RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 SKA1Q96BD8 255 aa14.94□□□□□ -0.02
IDH3A-219ENST00000560414 TRIM11Q96F44 468 aa14.94□□□□□ -0.02
IDH3A-219ENST00000560414 PPP1R16AQ96I34 528 aa14.94□□□□□ -0.02
IDH3A-219ENST00000560414 CELF6Q96J87 481 aaKnown RBP14.94□□□□□ -0.02
IDH3A-219ENST00000560414 ZFR2Q9UPR6 939 aaKnown RBP14.94□□□□□ -0.02
IDH3A-219ENST00000560414 PCDHGB2Q9Y5G2 931 aa14.94□□□□□ -0.02
IDH3A-219ENST00000560414 SCINQ9Y6U3 715 aa14.94□□□□□ -0.02
IDH3A-219ENST00000560414 A0A087X0T9 212 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 A0A1B0GTQ1 180 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 KRIT1O00522 736 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 FGF10O15520 208 aaPredicted RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 PRPSAP2O60256 369 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 GSRP00390 522 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 FAM228BP0C875 321 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 ADRB3P13945 408 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 TCF4P15884 667 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 ITGB7P26010 798 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 NEK3P51956 506 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 NXPH1P58417 271 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SNRPD1P62314 119 aaKnown RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 STAT4Q14765 748 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SUZ12Q15022 739 aaKnown RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SHBQ15464 509 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 ZNF284Q2VY69 593 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 MYLK3Q32MK0 819 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 PARP15Q460N3 678 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SETMARQ53H47 684 aaPredicted RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SLC45A4Q5BKX6 768 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 PPP6R3Q5H9R7 873 aaPredicted RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SEL1L3Q68CR1 1132 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 FBXL19Q6PCT2 694 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 PARS2Q7L3T8 475 aaKnown RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 HORMAD1Q86X24 394 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SPATS2Q86XZ4 545 aaKnown RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 GATAD2AQ86YP4 633 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 MFSD2AQ8NA29 543 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 OR2AP1Q8NGE2 309 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 BTBD6Q96KE9 485 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 ELF4Q99607 663 aaPredicted RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 SCNM1Q9BWG6 230 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 THAP2Q9H0W7 228 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 LRRC19Q9H756 370 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 MRPL47Q9HD33 250 aaKnown RBP14.93□□□□□ -0.02
IDH3A-219ENST00000560414 FZD3Q9NPG1 666 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 GDF3Q9NR23 364 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 DMTF1Q9Y222 760 aa14.93□□□□□ -0.02
IDH3A-219ENST00000560414 ZSCAN5CA6NGD5 496 aaPredicted RBP14.92□□□□□ -0.02
IDH3A-219ENST00000560414 C16orf96A6NNT2 1141 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 PRAMEF26H0Y7S4 382 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 J3KR12 359 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 FLRT2O43155 660 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 DAPK3O43293 454 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 PCDHGA12O60330 932 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 POP4O95707 220 aaKnown RBP14.92□□□□□ -0.02
IDH3A-219ENST00000560414 UGT2B4P06133 528 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 FTH1P19P0C7X4 201 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 IL1R2P27930 398 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 HTR7P34969 479 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 NUDT1P36639 197 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 CYTH1Q15438 398 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 NEK5Q6P3R8 708 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 SLCO6A1Q86UG4 719 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 CHCHD4Q8N4Q1 142 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 BAHD1Q8TBE0 780 aaPredicted RBP14.92□□□□□ -0.02
IDH3A-219ENST00000560414 IQCDQ96DY2 449 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 KLHL32Q96NJ5 620 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 SLC39A8Q9C0K1 460 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 FADS3Q9Y5Q0 445 aa14.92□□□□□ -0.02
IDH3A-219ENST00000560414 CEP295Q9C0D2 2601 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 RNF223E7ERA6 249 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 INSIG1O15503 277 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ERCC2P18074 760 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ABL2P42684 1182 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 PAPOLAP51003 745 aaKnown RBP14.91□□□□□ -0.02
IDH3A-219ENST00000560414 NDST2P52849 883 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 CLDN2P57739 230 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 RHOAP61586 193 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 BNIP3Q12983 259 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 SMTNL2Q2TAL5 461 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 INO80DQ53TQ3 878 aaPredicted RBP14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ZNF805Q5CZA5 627 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 CCDC122Q5T0U0 273 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ALKBH5Q6P6C2 394 aaKnown RBP14.91□□□□□ -0.02
IDH3A-219ENST00000560414 TMEM145Q8NBT3 493 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 RNF214Q8ND24 703 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ARHGEF26Q96DR7 871 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 EXOC2Q96KP1 924 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 GDAP1L1Q96MZ0 367 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 NUP85Q9BW27 656 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 TSPY26PQ9H489 355 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ZWILCHQ9H900 591 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 CWC15Q9P013 229 aaKnown RBP14.91□□□□□ -0.02
IDH3A-219ENST00000560414 UBA2Q9UBT2 640 aaPredicted RBP14.91□□□□□ -0.02
IDH3A-219ENST00000560414 GGT7Q9UJ14 662 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 ITM2BQ9Y287 266 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.91□□□□□ -0.02
IDH3A-219ENST00000560414 FRYQ5TBA9 3013 aa14.91□□□□□ -0.02
IDH3A-219ENST00000560414 MAP1BP46821 2468 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms