RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 RIOK3O14730 519 aaKnown RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 TPP1O14773 563 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 AREL1O15033 823 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 POP4O95707 220 aaKnown RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 JUNDP17535 347 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 PTPN9P43378 593 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 CDR2Q01850 454 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 POLD3Q15054 466 aaPredicted RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 CDKN3Q16667 212 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 CDO1Q16878 200 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 DEFB133Q30KQ1 61 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 TCP11X2Q5H9J9 407 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 RWDD4Q6NW29 188 aaKnown RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 IGF2-ASQ6U949 168 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 LEKR1Q6ZMV7 388 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 STRADAQ7RTN6 431 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 PHLDB2Q86SQ0 1253 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 RYBPQ8N488 228 aaPredicted RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 JOSD2Q8TAC2 188 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 GPT2Q8TD30 523 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 LMX1AQ8TE12 382 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 BTN2A2Q8WVV5 523 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 NAF1Q96HR8 494 aaKnown RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 GANQ9H2C0 597 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 ASCL3Q9NQ33 180 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 A0A1W2PNU3 283 aaPredicted RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 CPED1A4D0V7 1026 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 NEMP1O14524 444 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 KDELR3O43731 214 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 GFPT2O94808 682 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 LRIG2O94898 1065 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 UGT2B4P06133 528 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 PLEKP08567 350 aaPredicted RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 EEF1GP26641 437 aaKnown RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 SDC4P31431 198 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 SNRPD1P62314 119 aaKnown RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 FMO1Q01740 532 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 GUSBP11Q6P575 273 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 GDPD4Q6W3E5 623 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 EFL1Q7Z2Z2 1120 aaKnown RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 ZNF843Q8N446 348 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 TPCN2Q8NHX9 752 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 SLC30A5Q8TAD4 765 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 GRAMD1AQ96CP6 724 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 KLHL32Q96NJ5 620 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 BOCQ9BWV1 1114 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 OSBPL1AQ9BXW6 950 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 TCEAL2Q9H3H9 227 aaPredicted RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 SPASTQ9UBP0 616 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 DACH1Q9UI36 760 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 PNMA8BQ9ULN7 279 aaPredicted RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 HPCAL4Q9UM19 191 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 CHD5Q8TDI0 1954 aa16.18■□□□□ 0.18
SCFD1-224ENST00000557713 COL27A1Q8IZC6 1860 aaPredicted RBP16.18■□□□□ 0.18
SCFD1-224ENST00000557713 RAMP2O60895 175 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 GCATO75600 419 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 GJB6O95452 261 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 HDAC4P56524 1084 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 YPEL5P62699 121 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 PTP4A2Q12974 167 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 PTK2BQ14289 1009 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 CT47A1Q5JQC4 288 aaPredicted RBP16.17■□□□□ 0.18
SCFD1-224ENST00000557713 ATXN7L2Q5T6C5 722 aaPredicted RBP16.17■□□□□ 0.18
SCFD1-224ENST00000557713 TTC7BQ86TV6 843 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 CCDC185Q8N715 623 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 TBC1D31Q96DN5 1066 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 ARHGEF26Q96DR7 871 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 TBATAQ96M53 351 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 IL12RB2Q99665 862 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 C11orf70Q9BRQ4 267 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 NOL6Q9H6R4 1146 aaKnown RBP16.17■□□□□ 0.18
SCFD1-224ENST00000557713 ENTPD2Q9Y5L3 495 aa16.17■□□□□ 0.18
SCFD1-224ENST00000557713 HELZ2Q9BYK8 2649 aaKnown RBP16.16■□□□□ 0.18
SCFD1-224ENST00000557713 MMP20O60882 483 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 UNGP13051 313 aaPredicted RBP16.16■□□□□ 0.18
SCFD1-224ENST00000557713 TIMP2P16035 220 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 ITIH2P19823 946 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
SCFD1-224ENST00000557713 IGFALSP35858 605 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 KLK7P49862 253 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 THOP1P52888 689 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 UCNP55089 124 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 ADKP55263 362 aaKnown RBP16.16■□□□□ 0.18
SCFD1-224ENST00000557713 JAM2P57087 298 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 TMPRSS3P57727 454 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 C1orf61Q13536 156 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 NR0B2Q15466 257 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 PERM1Q5SV97 790 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 BROXQ5VW32 411 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 KCNE4Q8WWG9 221 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 NTAN1Q96AB6 310 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 ATXN7L3BQ96GX2 97 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 PRR11Q96HE9 360 aaPredicted RBP16.16■□□□□ 0.18
SCFD1-224ENST00000557713 VCPIP1Q96JH7 1222 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 SLC46A1Q96NT5 459 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 PCDHB18PQ96TA0 734 aa16.16■□□□□ 0.18
SCFD1-224ENST00000557713 DPH1Q9BZG8 443 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms