RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 NDST2P52849 883 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ESRRGP62508 458 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 GALNT2Q10471 571 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 RALGDSQ12967 914 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF460Q14592 562 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 KLHL35Q6PF15 583 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 DHRS4L2Q6PKH6 230 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ZBTB49Q6ZSB9 765 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TRIM74Q86UV6 250 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TRIM73Q86UV7 250 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CEP97Q8IW35 865 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 NPWQ8N729 165 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TXNDC5Q8NBS9 432 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 APPL2Q8NEU8 664 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 FNDC8Q8TC99 324 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TEKT5Q96M29 485 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 FTHL17Q9BXU8 183 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 NOL11Q9H8H0 719 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 LIN28AQ9H9Z2 209 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CNOT6Q9ULM6 557 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 UBQLN1Q9UMX0 589 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 FIS1Q9Y3D6 152 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SBF1O95248 1867 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 PRORSD1PA6NEY8 169 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 FBP2O00757 339 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 MRASO14807 208 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ZSCAN9O15535 394 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 GPC4O75487 556 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 JCHAINP01591 159 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 HSPA8P11142 646 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SCAPQ12770 1279 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SEMA3BQ13214 749 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 PSMD5Q16401 504 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 PCID2Q5JVF3 399 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ACBD5Q5T8D3 534 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 IRAK1BP1Q5VVH5 260 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 PKN3Q6P5Z2 889 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC27A1Q6PCB7 646 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CNTN4Q8IWV2 1026 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 LRRC43Q8N309 656 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SPATA6LQ8N4H0 392 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 ANKFN1Q8N957 763 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SGF29Q96ES7 293 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 HNRNPABQ99729 332 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC25A23Q9BV35 468 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 PLGRKTQ9HBL7 147 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 EML4Q9HC35 981 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 VPS45Q9NRW7 570 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TUBA8Q9NY65 449 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CCDC167Q9P0B6 97 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CD300AQ9UGN4 299 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CROTQ9UKG9 612 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TSC2P49815 1807 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 CROCCQ5TZA2 2017 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 TANC1Q9C0D5 1861 aa11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 A0A087WXM4 84 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 A0A087X1B8 175 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 PIRO00625 290 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 CD4P01730 458 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 HNRNPLP14866 589 aaKnown RBP eCLIP11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 NDUFV1P49821 464 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 MPP1Q00013 466 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 CTBP1Q13363 440 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 LAMC2Q13753 1193 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF618Q5T7W0 954 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM45BPQ6NSW5 357 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 HMBOX1Q6NT76 420 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 PPP4R4Q6NUP7 873 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF554Q86TJ5 538 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 DHFR2Q86XF0 187 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 BBS5Q8N3I7 341 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 HMGCLL1Q8TB92 370 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM45AQ8TCE6 357 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 GRIN3AQ8TCU5 1115 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 ELMO2Q96JJ3 720 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 OSBPL6Q9BZF3 934 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 MEAF6Q9HAF1 191 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 GDAP2Q9NXN4 497 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 DNAJC25-GNG10A0A024R161 153 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 CNMDO75829 334 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 HNRNPCP07910 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 NPR3P17342 541 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC12A2P55011 1212 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 ARHGAP1Q07960 439 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 VGLL4Q14135 290 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 MAP7D1Q3KQU3 841 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 KCTD21Q4G0X4 260 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 NHSL2Q5HYW2 709 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 HACD2Q6Y1H2 254 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 HFE2Q6ZVN8 426 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 DENND6AQ8IWF6 608 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM47BQ8NA70 645 aa11.93□□□□□ -0.5
VIPAS39-211ENST00000557658 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms