RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CST6Q15828 149 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 ALG1LQ6GMV1 187 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 NCEH1Q6PIU2 408 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 CCDC137Q6PK04 289 aaKnown RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 KIAA1324Q6UXG2 1013 aaKnown RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 TAB3Q8N5C8 712 aaPredicted RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 SPATA22Q8NHS9 363 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 VAT1Q99536 393 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 C1QTNF1Q9BXJ1 281 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 TPSD1Q9BZJ3 242 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 GLOD4Q9HC38 313 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 PRMT8Q9NR22 394 aaPredicted RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 UBP1Q9NZI7 540 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 BCCIPQ9P287 314 aaKnown RBP eCLIP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 DRG1Q9Y295 367 aaKnown RBP15.47■□□□□ 0.07
NEDD1-213ENST00000557644 PCDHGC4Q9Y5F7 938 aa15.47■□□□□ 0.07
NEDD1-213ENST00000557644 MYO15AQ9UKN7 3530 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 APBB3O95704 486 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 MMP2P08253 660 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 STIP1P31948 543 aaKnown RBP15.46■□□□□ 0.07
NEDD1-213ENST00000557644 CSNK1DP48730 415 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 ZNF776Q68DI1 518 aaPredicted RBP15.46■□□□□ 0.07
NEDD1-213ENST00000557644 RTP4Q96DX8 246 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 SIPA1Q96FS4 1042 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 SPATA13Q96N96 652 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 RBM15Q96T37 977 aaKnown RBP eCLIP15.46■□□□□ 0.07
NEDD1-213ENST00000557644 FERMT1Q9BQL6 677 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 LRFN3Q9BTN0 628 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 MRFAP1Q9Y605 127 aa15.46■□□□□ 0.07
NEDD1-213ENST00000557644 CFAP69A5D8W1 941 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 C5orf60A6NFR6 353 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 KPNA3O00505 521 aaPredicted RBP15.46■□□□□ 0.06
NEDD1-213ENST00000557644 ALOX15BO15296 676 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 RNASEH1O60930 286 aaKnown RBP15.46■□□□□ 0.06
NEDD1-213ENST00000557644 PAPSS2O95340 614 aaPredicted RBP15.46■□□□□ 0.06
NEDD1-213ENST00000557644 MT-CYBP00156 380 aaPredicted RBP15.46■□□□□ 0.06
NEDD1-213ENST00000557644 SLC8A1P32418 973 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 CD86P42081 329 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 GSTA5Q7RTV2 222 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 PRPF39Q86UA1 669 aaKnown RBP15.46■□□□□ 0.06
NEDD1-213ENST00000557644 KLHL7Q8IXQ5 586 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 PRCCQ92733 491 aaPredicted RBP15.46■□□□□ 0.06
NEDD1-213ENST00000557644 SERGEFQ9UGK8 458 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 EBF1Q9UH73 591 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 TRHDEQ9UKU6 1024 aa15.46■□□□□ 0.06
NEDD1-213ENST00000557644 GCATO75600 419 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 STK10O94804 968 aaKnown RBP15.45■□□□□ 0.06
NEDD1-213ENST00000557644 PRNPP04156 253 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 AP1S1P61966 158 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 CSTF1Q05048 431 aaKnown RBP15.45■□□□□ 0.06
NEDD1-213ENST00000557644 RAD51Q06609 339 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 TRIP13Q15645 432 aaPredicted RBP15.45■□□□□ 0.06
NEDD1-213ENST00000557644 DSG4Q86SJ6 1040 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 RASSF3Q86WH2 238 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 CAMKK1Q8N5S9 505 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 TMIEQ8NEW7 156 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 SPATA4Q8NEY3 305 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 ATL2Q8NHH9 583 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 IMP4Q96G21 291 aaKnown RBP15.45■□□□□ 0.06
NEDD1-213ENST00000557644 KLHL32Q96NJ5 620 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 GORASP1Q9BQQ3 440 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 CPEB1Q9BZB8 566 aaKnown RBP15.45■□□□□ 0.06
NEDD1-213ENST00000557644 SLC25A51Q9H1U9 297 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 FBRSQ9HAH7 460 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 RSPH14Q9UHP6 348 aa15.45■□□□□ 0.06
NEDD1-213ENST00000557644 ALDH1A2O94788 518 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 METTL18O95568 372 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 TDGF1P13385 188 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 PSMB4P28070 264 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 C2orf54Q08AI8 447 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 TRAF2Q12933 501 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 FAXCQ5TGI0 409 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 GDPD4Q6W3E5 623 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 CCDC89Q8N998 374 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 ARRDC3Q96B67 414 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 OXNAD1Q96HP4 312 aaPredicted RBP15.44■□□□□ 0.06
NEDD1-213ENST00000557644 GBA3Q9H227 469 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 ATP13A3Q9H7F0 1226 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 A0A1W2PP55 124 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 TRAFD1O14545 582 aaPredicted RBP15.44■□□□□ 0.06
NEDD1-213ENST00000557644 OPHN1O60890 802 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 DNTTP04053 509 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 DRD3P35462 400 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 FNTAP49354 379 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 SKOR1P84550 965 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 BCL2L1Q07817 233 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 ARHGEF18Q6ZSZ5 1173 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 ZSWIM9Q86XI8 627 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 FRMD1Q8N878 549 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 PDCD6IPQ8WUM4 868 aaKnown RBP15.44■□□□□ 0.06
NEDD1-213ENST00000557644 RLN3Q8WXF3 142 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 SUV39H2Q9H5I1 410 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 HAUS2Q9NVX0 235 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 ZNF318Q5VUA4 2279 aa15.44■□□□□ 0.06
NEDD1-213ENST00000557644 C1QTNF3-AMACRE9PGA6 284 aa15.43■□□□□ 0.06
NEDD1-213ENST00000557644 SERPINF2P08697 491 aa15.43■□□□□ 0.06
NEDD1-213ENST00000557644 MRPS25P82663 173 aaKnown RBP15.43■□□□□ 0.06
NEDD1-213ENST00000557644 P3H1Q32P28 736 aa15.43■□□□□ 0.06
NEDD1-213ENST00000557644 LRRC73Q5JTD7 316 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms