RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SLC44A2Q8IWA5 706 aaPredicted RBP5.62□□□□□ -1.51
HIF1A-209ENST00000556827 HMGB4Q8WW32 186 aa5.62□□□□□ -1.51
HIF1A-209ENST00000556827 GLMPQ8WWB7 406 aa5.62□□□□□ -1.51
HIF1A-209ENST00000556827 CUL5Q93034 780 aa5.62□□□□□ -1.51
HIF1A-209ENST00000556827 TRMT61AQ96FX7 289 aaKnown RBP5.62□□□□□ -1.51
HIF1A-209ENST00000556827 REXO5Q96IC2 774 aaKnown RBP5.62□□□□□ -1.51
HIF1A-209ENST00000556827 BRD8Q9H0E9 1235 aa5.62□□□□□ -1.51
HIF1A-209ENST00000556827 PABPC3Q9H361 631 aaKnown RBP5.62□□□□□ -1.51
HIF1A-209ENST00000556827 MLXIPLQ9NP71 852 aa5.62□□□□□ -1.51
HIF1A-209ENST00000556827 KCNK9Q9NPC2 374 aa5.62□□□□□ -1.51
HIF1A-209ENST00000556827 PA2G4Q9UQ80 394 aaKnown RBP5.62□□□□□ -1.51
HIF1A-209ENST00000556827 UBE2J1Q9Y385 318 aaPredicted RBP5.62□□□□□ -1.51
HIF1A-209ENST00000556827 IPO5O00410 1097 aaKnown RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 MATN1P21941 496 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 BACE1P56817 501 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 RPL15P61313 204 aaKnown RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 AP2B1P63010 937 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 RNASELQ05823 741 aaKnown RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 POSTNQ15063 836 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 PDCD2Q16342 344 aaPredicted RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 PFKFB3Q16875 520 aaPredicted RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 LRIT3Q3SXY7 679 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 C4orf46Q504U0 113 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 TTC39AQ5SRH9 613 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 ATPAF1Q5TC12 328 aaPredicted RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 WDR78Q5VTH9 848 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 MFSD14CQ5VZR4 134 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 NAA16Q6N069 864 aaPredicted RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 TECPR1Q7Z6L1 1165 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 TDHQ8IZJ6 230 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 OSR1Q8TAX0 266 aaPredicted RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 ZNF398Q8TD17 642 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 MAP4K1Q92918 833 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 TM2D2Q9BX73 214 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 PRO3102Q9H379 93 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 ELAC1Q9H777 363 aaKnown RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 AGO4Q9HCK5 861 aaKnown RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 DDX4Q9NQI0 724 aaKnown RBP5.61□□□□□ -1.51
HIF1A-209ENST00000556827 PRDM8Q9NQV8 689 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 ARL8BQ9NVJ2 186 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 CACNA1IQ9P0X4 2223 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 SLC12A4Q9UP95 1085 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 B3GNT3Q9Y2A9 372 aa5.61□□□□□ -1.51
HIF1A-209ENST00000556827 ZNF646O15015 1829 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 hCG_1642624A0A1W2PR95 340 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 HMX3A6NHT5 357 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 IFRD1O00458 451 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 NKX2-8O15522 239 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 PIP5K1CO60331 668 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 SLC3A2P08195 630 aaKnown RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 HOXA7P31268 230 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 SLC8A1P32418 973 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 HOXD12P35452 270 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 NR4A2P43354 598 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 POLGP54098 1239 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 CBFBQ13951 182 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 ZNF260Q3ZCT1 412 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 ZNF569Q5MCW4 686 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 TMEM63BQ5T3F8 832 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 AWAT2Q6E213 333 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 SHC4Q6S5L8 630 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 SUGP1Q8IWZ8 645 aaKnown RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 OTUD7AQ8TE49 926 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 PIGOQ8TEQ8 1089 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 ARHGAP45Q92619 1136 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 NSUN4Q96CB9 384 aaKnown RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 FAR2Q96K12 515 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 GPR78Q96P69 363 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 MEIS3Q99687 375 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 PAGR1Q9BTK6 254 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 HMG20BQ9P0W2 317 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 MORF4L1Q9UBU8 362 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 GJD2Q9UKL4 321 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 LZTS1Q9Y250 596 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 MORC2Q9Y6X9 1032 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 ECM29Q5VYK3 1845 aa5.6□□□□□ -1.51
HIF1A-209ENST00000556827 RBBP6Q7Z6E9 1792 aaKnown RBP5.6□□□□□ -1.51
HIF1A-209ENST00000556827 AGAP5A6NIR3 686 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 SLC38A8A6NNN8 435 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TTC34A8MYJ7 566 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TPD52L2O43399 206 aaKnown RBP5.59□□□□□ -1.51
HIF1A-209ENST00000556827 HALP42357 657 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 ZNF84P51523 738 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 PRKAA2P54646 552 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TAS2R50P59544 299 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 GHRHRQ02643 423 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 MTX1Q13505 466 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 FHL1Q13642 323 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 LAMB3Q13751 1172 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 RPS6KA2Q15349 733 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TANGO2Q6ICL3 276 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 NFRKBQ6P4R8 1299 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 GPR142Q7Z601 462 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 MRPL10Q7Z7H8 261 aaKnown RBP5.59□□□□□ -1.51
HIF1A-209ENST00000556827 LAS2Q8IYD9 372 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 CSGALNACT1Q8TDX6 532 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms