RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 OTOP3Q7RTS5 596 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 GPRIN1Q7Z2K8 1008 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TAC4Q86UU9 113 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 DDI1Q8WTU0 396 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 RNF34Q969K3 372 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 CATSPER2Q96P56 530 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 PGLYRP2Q96PD5 576 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 MRPS26Q9BYN8 205 aaKnown RBP16.35■□□□□ 0.21
TUBB3-209ENST00000555609 CHST12Q9NRB3 414 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TREX1Q9NSU2 369 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TBC1D13Q9NVG8 400 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 SUCOQ9UBS9 1254 aaKnown RBP16.35■□□□□ 0.21
TUBB3-209ENST00000555609 COPG1Q9Y678 874 aaKnown RBP16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TCAF2A6NFQ2 919 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 CAPN8A6NHC0 703 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 BTBD19C9JJ37 291 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 SDHDO14521 159 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 ACOT8O14734 319 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TREHO43280 583 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 VAPBO95292 243 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TNFAIP8O95379 198 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 PGK1P00558 417 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 AMHP03971 560 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 RBP1P09455 135 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 RGS2P41220 211 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 CEACAM7Q14002 265 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 SQLEQ14534 574 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 TLR1Q15399 786 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 FAM83EQ2M2I3 478 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 USP41Q3LFD5 358 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 PPM1LQ5SGD2 360 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 AGAP9Q5VTM2 703 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 PELI3Q8N2H9 469 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 EFCAB3Q8N7B9 438 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 AGR3Q8TD06 166 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 FATE1Q969F0 183 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 NXNL1Q96CM4 212 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 DUS3LQ96G46 650 aaKnown RBP16.35■□□□□ 0.21
TUBB3-209ENST00000555609 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 GCNAQ96QF7 691 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 RANBP9Q96S59 729 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 ACBD6Q9BR61 282 aa16.35■□□□□ 0.21
TUBB3-209ENST00000555609 ENO3P13929 434 aaPredicted RBP16.34■□□□□ 0.21
TUBB3-209ENST00000555609 HOXC8P31273 242 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 CLCN5P51795 746 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 NRG1Q02297 640 aaPredicted RBP16.34■□□□□ 0.21
TUBB3-209ENST00000555609 MAP7Q14244 749 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 FAM110CQ1W6H9 321 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 TAF2Q6P1X5 1199 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 KLC3Q6P597 504 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 FAM171BQ6P995 826 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 FBXL19Q6PCT2 694 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 SLC22A9Q8IVM8 553 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 ARHGAP12Q8IWW6 846 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 DQX1Q8TE96 717 aaKnown RBP16.34■□□□□ 0.21
TUBB3-209ENST00000555609 ASB9Q96DX5 294 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 TRMOQ9BU70 441 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 FICDQ9BVA6 458 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 ARNT2Q9HBZ2 717 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 UBP1Q9NZI7 540 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 GIT1Q9Y2X7 761 aa16.34■□□□□ 0.21
TUBB3-209ENST00000555609 MAFKO60675 156 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 SAT1P21673 171 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 SLC26A3P40879 764 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 GLRBP48167 497 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 ATP4BP51164 291 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 INHBCP55103 352 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 MRPS22P82650 360 aaKnown RBP16.33■□□□□ 0.21
TUBB3-209ENST00000555609 PFKPQ01813 784 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 SLC14A2Q15849 920 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 TSTD2Q5T7W7 516 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 ESRP1Q6NXG1 681 aaKnown RBP16.33■□□□□ 0.21
TUBB3-209ENST00000555609 RANBP10Q6VN20 620 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 HACD2Q6Y1H2 254 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 TRIM67Q6ZTA4 783 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 TLK2Q86UE8 772 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 METTL23Q86XA0 190 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 BHLHE22Q8NFJ8 381 aaPredicted RBP16.33■□□□□ 0.21
TUBB3-209ENST00000555609 NPLOC4Q8TAT6 608 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 CELF6Q96J87 481 aaKnown RBP16.33■□□□□ 0.21
TUBB3-209ENST00000555609 ELMO2Q96JJ3 720 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 FTHL17Q9BXU8 183 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 UNC93B1Q9H1C4 597 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 FBXO5Q9UKT4 447 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 NEU3Q9UQ49 428 aa16.33■□□□□ 0.21
TUBB3-209ENST00000555609 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 GOLGA8TH3BQL2 631 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 DFFAO00273 331 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 PAPSS2O95340 614 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-209ENST00000555609 CRTAMO95727 393 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 C8BP07358 591 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 SMIM18P0DKX4 95 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 ODC1P11926 461 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 ARNTP27540 789 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 PMLP29590 882 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 AVPR1AP37288 418 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 TAS2R39P59534 338 aa16.33■□□□□ 0.2
TUBB3-209ENST00000555609 MPP1Q00013 466 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms