RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PDCLQ13371 301 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 DHX34Q14147 1143 aaKnown RBP3.72□□□□□ -1.81
SNX6-204ENST00000555541 CCDC6Q16204 474 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 XKR9Q5GH70 373 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 SYCP2LQ5T4T6 812 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 SYNE3Q6ZMZ3 975 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 PATL1Q86TB9 770 aaKnown RBP3.72□□□□□ -1.81
SNX6-204ENST00000555541 KLHDC8BQ8IXV7 354 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 CACNA2D3Q8IZS8 1091 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 ANKRD44Q8N8A2 993 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 FSIP1Q8NA03 581 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 RFWD2Q8NHY2 731 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 HERC2P3Q9BVR0 1158 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 EVA1AQ9H8M9 152 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 UBTD1Q9HAC8 227 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 THAP1Q9NVV9 213 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 NFS1Q9Y697 457 aa3.72□□□□□ -1.81
SNX6-204ENST00000555541 TIMM23O14925 209 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 GM2AP17900 193 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 HOXC13P31276 330 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 PNPLA4P41247 253 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 SKIV2L2P42285 1042 aaKnown RBP3.71□□□□□ -1.82
SNX6-204ENST00000555541 SMAD1Q15797 465 aaKnown RBP3.71□□□□□ -1.82
SNX6-204ENST00000555541 TUBA1AQ71U36 451 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 SYT13Q7L8C5 426 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 RASGRP2Q7LDG7 609 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 KRTAP7-1Q8IUC3 87 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 OR4N2Q8NGD1 307 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 TUBA1CQ9BQE3 449 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 GFRA4Q9GZZ7 299 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 PLEKHA2Q9HB19 425 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 G6PC2Q9NQR9 355 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 GRHL1Q9NZI5 618 aa3.71□□□□□ -1.82
SNX6-204ENST00000555541 GREB1LQ9C091 1923 aaPredicted RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 KDM4EB2RXH2 506 aaPredicted RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 E7EVH7 732 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 KIF1CO43896 1103 aaKnown RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 TFRCP02786 760 aaKnown RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 CSF1P09603 554 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 CKMT1AP12532 417 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 DGKAP23743 735 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 FMO4P31512 558 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 MCM2P49736 904 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 MVDP53602 400 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 DMP1Q13316 513 aaPredicted RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 THOC5Q13769 683 aaKnown RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 BLMHQ13867 455 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 FCN2Q15485 313 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 RUNDC3AQ59EK9 446 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 TMC8Q8IU68 726 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 CIARTQ8N365 385 aaPredicted RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 IL17RCQ8NAC3 791 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 OR6Y1Q8NGX8 325 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 CD101Q93033 1021 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 KTI12Q96EK9 354 aaPredicted RBP3.7□□□□□ -1.82
SNX6-204ENST00000555541 UHRF2Q96PU4 802 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 MVB12BQ9H7P6 319 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 EBF2Q9HAK2 575 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 FBXO40Q9UH90 709 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 DHDHQ9UQ10 334 aa3.7□□□□□ -1.82
SNX6-204ENST00000555541 HMX3A6NHT5 357 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 CHL1O00533 1208 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 SEPT4O43236 478 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 STRNO43815 780 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 METTL18O95568 372 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 PMS2P2O95744 297 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 IGHV4-30-4P0DP06 118 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 YWHAQP27348 245 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 CST5P28325 142 aaPredicted RBP3.69□□□□□ -1.82
SNX6-204ENST00000555541 SSTR2P30874 369 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 GJC1P36383 396 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 MTNR1AP48039 350 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 PRKAA2P54646 552 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 NCAPH2Q6IBW4 605 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 TYW3Q6IPR3 259 aaKnown RBP3.69□□□□□ -1.82
SNX6-204ENST00000555541 FOXL2NBQ6ZUU3 175 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 CCDC146Q8IYE0 955 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 AADATQ8N5Z0 425 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 NEK9Q8TD19 979 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 TAF1DQ9H5J8 278 aaPredicted RBP3.69□□□□□ -1.82
SNX6-204ENST00000555541 CXorf56Q9H5V9 222 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 PLCB1Q9NQ66 1216 aa3.69□□□□□ -1.82
SNX6-204ENST00000555541 SRP68Q9UHB9 627 aaKnown RBP3.69□□□□□ -1.82
SNX6-204ENST00000555541 MORC2Q9Y6X9 1032 aaPredicted RBP3.69□□□□□ -1.82
SNX6-204ENST00000555541 IGHV4OR15-8A0A075B7B6 117 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 CPED1A4D0V7 1026 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 OR6C68A6NDL8 312 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 CLGNO14967 610 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 ZG16O60844 167 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 KRT38O76015 456 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 CBX6O95503 412 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 AMBPP02760 352 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 GPR12P47775 334 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 ZNF132P52740 706 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 ARHGAP8P85298 464 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 BYSLQ13895 437 aaKnown RBP3.68□□□□□ -1.82
SNX6-204ENST00000555541 IL13RA2Q14627 380 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 AP5B1Q2VPB7 878 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 CCDC38Q502W7 563 aa3.68□□□□□ -1.82
SNX6-204ENST00000555541 C14orf177Q52M58 125 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms