RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TMEM115Q12893 351 aaPredicted RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 RUNX2Q13950 521 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 RNPS1Q15287 305 aaKnown RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 CPLX2Q6PUV4 134 aaKnown RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 GSTA5Q7RTV2 222 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 PDILTQ8N807 584 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 RASSF8Q8NHQ8 419 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 CREB3L4Q8TEY5 395 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 USP6NLQ92738 828 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 INTS12Q96CB8 462 aaKnown RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 RNF183Q96D59 192 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 ITPAQ9BY32 194 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 HCFC1R1Q9NWW0 138 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 PLEKHB1Q9UF11 243 aaPredicted RBP5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 LYVE1Q9Y5Y7 322 aa5.7□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZMYM2Q9UBW7 1377 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 TYW5A2RUC4 315 aaKnown RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 DOK2O60496 412 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 GFPT2O94808 682 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 HOXB5P09067 269 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 ENO3P13929 434 aaPredicted RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 CDH2P19022 906 aaPredicted RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 TNFSF8P32971 234 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 GNAQP50148 359 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 EFNA5P52803 228 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 PPP2R5BQ15173 497 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 TRIP6Q15654 476 aaKnown RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 FAM205BPQ63HN1 556 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 CCDC129Q6ZRS4 1044 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 FAM217AQ8IXS0 508 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 RPAP2Q8IXW5 612 aaPredicted RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 KIAA2013Q8IYS2 634 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 CADM3Q8N126 398 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 PIGOQ8TEQ8 1089 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 DDB2Q92466 427 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 OTULINQ96BN8 352 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 MAP7D2Q96T17 732 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 STRA6Q9BX79 667 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 B3GNT4Q9C0J1 378 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 SYNCQ9H7C4 482 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 MSRB1Q9NZV6 116 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 PTGFRNQ9P2B2 879 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 INTS6Q9UL03 887 aaKnown RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 GPR34Q9UPC5 381 aa5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 TTBK1Q5TCY1 1321 aaPredicted RBP5.69□□□□□ -1.5
CKS1BP1-201ENST00000555221 A0A0G2JK05 382 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 GAGE12JA6NER3 117 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 LIPT2A6NK58 231 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 USP17L23D6RBM5 183 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 HSPB6O14558 160 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 AP3D1O14617 1153 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 PRR35P0CG20 571 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 ALOX12P18054 663 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 HOXD9P28356 352 aaPredicted RBP5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 TTKP33981 857 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 RYKP34925 604 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 SRSF4Q08170 494 aaKnown RBP5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 EZH2Q15910 746 aaKnown RBP5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 MEA1Q16626 185 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 PLEKHO1Q53GL0 409 aaPredicted RBP5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 C10orf25Q5T742 122 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 NCEH1Q6PIU2 408 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 LURAP1LQ8IV03 231 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 HORMAD2Q8N7B1 307 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 FRMD1Q8N878 549 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 MCPH1Q8NEM0 835 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 MPLKIPQ8TAP9 179 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 BICD2Q8TD16 824 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 POMGNT1Q8WZA1 660 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 BBS4Q96RK4 519 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 CDT1Q9H211 546 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 HAUS2Q9NVX0 235 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 ZNF70Q9UC06 446 aaPredicted RBP5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 SLCO3A1Q9UIG8 710 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 HAO1Q9UJM8 370 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 FAM96BQ9Y3D0 163 aa5.68□□□□□ -1.5
CKS1BP1-201ENST00000555221 A0A1W2PRG0 241 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 MASP2O00187 686 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 ADAM10O14672 748 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 PPFIA2O75334 1257 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 SEC31AO94979 1220 aaKnown RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 MLYCDO95822 493 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 MT-CYBP00156 380 aaPredicted RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 TFP02787 698 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 KLKB1P03952 638 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 EIF2S1P05198 315 aaKnown RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 HDAC4P56524 1084 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 CLDN2P57739 230 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 INPP5JQ15735 1006 aaPredicted RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 SRSF7Q16629 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 SMN1Q16637 294 aaKnown RBP5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 MORN5Q5VZ52 161 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 HEPHL1Q6MZM0 1159 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 SLC2A7Q6PXP3 512 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 IKBIPQ70UQ0 350 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 KDM1BQ8NB78 822 aa5.67□□□□□ -1.5
CKS1BP1-201ENST00000555221 TMEM116Q8NCL8 245 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms