RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CCL7P80098 99 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 NUGGCQ68CJ6 796 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 NEK5Q6P3R8 708 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 HJURPQ8NCD3 748 aaPredicted RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 NEK11Q8NG66 645 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 OR8D1Q8WZ84 308 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 NKD1Q969G9 470 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 CCDC74AQ96AQ1 378 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 IQCDQ96DY2 449 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 HEXIM2Q96MH2 286 aaKnown RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 CMKLR1Q99788 373 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 CPEB1Q9BZB8 566 aaKnown RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 IRX2Q9BZI1 471 aaPredicted RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 CASS4Q9NQ75 786 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 DONSONQ9NYP3 566 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 SPASTQ9UBP0 616 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 SFMBT1Q9UHJ3 866 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 TP53TG5Q9Y2B4 290 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 FHOD1Q9Y613 1164 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 AKAP9Q99996 3911 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 CSMD2Q7Z408 3487 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 GOLGA6L7A0A1B0GV03 622 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 TYW5A2RUC4 315 aaKnown RBP17.23■□□□□ 0.35
NEK9-204ENST00000554258 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 IRAK2O43187 625 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 JAM2P57087 298 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 RNF139Q8WU17 664 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 TWNKQ96RR1 684 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 DUSP16Q9BY84 665 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 PRDM8Q9NQV8 689 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 GPR27Q9NS67 375 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 RABGEF1Q9UJ41 708 aa17.23■□□□□ 0.35
NEK9-204ENST00000554258 A0A1W2PQJ5 194 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 EFCAB7A8K855 629 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 RNF225M0QZC1 329 aaPredicted RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 FOXN3O00409 490 aaPredicted RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 ANXA6P08133 673 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 RAD23BP54727 409 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 ADKP55263 362 aaKnown RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 POLR2FP61218 127 aaKnown RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 C1orf61Q13536 156 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 SEPT6Q14141 434 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 FSCBQ5H9T9 825 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 KYAT3Q6YP21 454 aaKnown RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 FAM71AQ8IYT1 594 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 SLC4A11Q8NBS3 891 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 BTN2A2Q8WVV5 523 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 APOBEC4Q8WW27 367 aaKnown RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 BMFQ96LC9 184 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
NEK9-204ENST00000554258 EPAS1Q99814 870 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 NT5C1AQ9BXI3 368 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 GULP1Q9UBP9 304 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 MYO6Q9UM54 1294 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 HS3ST3A1Q9Y663 406 aa17.22■□□□□ 0.35
NEK9-204ENST00000554258 ABCA2Q9BZC7 2435 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 A0A1W2PQM1 296 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 POM121BA6NF01 834 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 LMO7DNF2Z398 122 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 MSI1O43347 362 aaKnown RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 GCATO75600 419 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 PRKAR1AP10644 381 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 CD58P19256 250 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 SLC11A2P49281 568 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 PDE1CQ14123 709 aaPredicted RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 NAA30Q147X3 362 aaPredicted RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 ARHGAP44Q17R89 818 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 PRRT3Q5FWE3 981 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 SPECC1LQ69YQ0 1117 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 RBFAQ8N0V3 343 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 LRRN3Q9H3W5 708 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 APOBEC3BQ9UH17 382 aaKnown RBP17.21■□□□□ 0.35
NEK9-204ENST00000554258 KIAA1257Q9ULG3 409 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 PPM1HQ9ULR3 514 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 CAPN11Q9UMQ6 739 aa17.21■□□□□ 0.35
NEK9-204ENST00000554258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.21■□□□□ 0.35
NEK9-204ENST00000554258 TTLL8A6PVC2 850 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 NKX2-8O15522 239 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 PCDH8O95206 1070 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 PAEPP09466 180 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 NR1D1P20393 614 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 RABIFP47224 123 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 RPS24P62847 133 aaKnown RBP17.2■□□□□ 0.34
NEK9-204ENST00000554258 GSE1Q14687 1217 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 PIP5KL1Q5T9C9 394 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 SEL1L3Q68CR1 1132 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 TMPRSS9Q7Z410 1059 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 APCDD1Q8J025 514 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 CPT1CQ8TCG5 803 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 PRICKLE1Q96MT3 831 aaPredicted RBP17.2■□□□□ 0.34
NEK9-204ENST00000554258 B3GNT4Q9C0J1 378 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 PCDHB4Q9Y5E5 795 aa17.2■□□□□ 0.34
NEK9-204ENST00000554258 F8VZ95 297 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 ADCY5O95622 1261 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms