RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 FKBP15Q5T1M5 1219 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 CLEC14AQ86T13 490 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 PARGQ86W56 976 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 DCP2Q8IU60 420 aaKnown RBP11.76□□□□□ -0.53
TUBB3-204ENST00000554116 ANKRD20A12PQ8NF67 263 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 CENPTQ96BT3 561 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 C1orf74Q96LT6 269 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 TBCBQ99426 244 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 DUSP23Q9BVJ7 150 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 STK33Q9BYT3 514 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 MAGEB5Q9BZ81 275 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 THSD1Q9NS62 852 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 RABGEF1Q9UJ41 708 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 SALL4Q9UJQ4 1053 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 PCDHGA8Q9Y5G5 932 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 NBASA2RRP1 2371 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 ILVBLA1L0T0 632 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 CYP11B1P15538 503 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 JUNDP17535 347 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 ITIH2P19823 946 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 ACVRL1P37023 503 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 GABRB2P47870 512 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 KLK7P49862 253 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 DUSP3P51452 185 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 CCNHP51946 323 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 NEK3P51956 506 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 SNX16P57768 344 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 RPS21P63220 83 aaKnown RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 TYRO3Q06418 890 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 SRSF6Q13247 344 aaKnown RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 C1orf61Q13536 156 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 PDE1CQ14123 709 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 ARL13BQ3SXY8 428 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 LINC00303Q3SY05 128 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 C2CD6Q53TS8 623 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 CARD16Q5EG05 197 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 KIAA1161Q6NSJ0 714 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 FAM174AQ8TBP5 190 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 LMX1AQ8TE12 382 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 ASB12Q8WXK4 309 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 FUBP1Q96AE4 644 aaKnown RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 FEM1CQ96JP0 617 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 HEPHQ9BQS7 1158 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 ABCG4Q9H172 646 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 SYNCQ9H7C4 482 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 LIMA1Q9UHB6 759 aaKnown RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 NEU3Q9UQ49 428 aa11.75□□□□□ -0.53
TUBB3-204ENST00000554116 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-204ENST00000554116 PRRC2CQ9Y520 2896 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 DOPEY2Q9Y3R5 2298 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 NTN3O00634 580 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 TPP1O14773 563 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 AREL1O15033 823 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 OR1E1P30953 314 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 CDH5P33151 784 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 IGFALSP35858 605 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 RABIFP47224 123 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 SULT1E1P49888 294 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 RNASE9P60153 205 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 POLR2FP61218 127 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 MTA1Q13330 715 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 NCAPHQ15003 741 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 TAF3Q5VWG9 929 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 KCTD16Q68DU8 428 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 PRICKLE2Q7Z3G6 844 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 B3GNT8Q7Z7M8 397 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 XYLT1Q86Y38 959 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 LURAP1LQ8IV03 231 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 AOPEPQ8N6M6 819 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 PCDH20Q8N6Y1 951 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 OR6K2Q8NGY2 324 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 SPON2Q9BUD6 331 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 LRRC61Q9BV99 259 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 CEP44Q9C0F1 390 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 NAT10Q9H0A0 1025 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 GANQ9H2C0 597 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 DYRK4Q9NR20 520 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 MBNL1Q9NR56 388 aaKnown RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 FAM207AQ9NSI2 230 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 TMEM59LQ9UK28 342 aa11.74□□□□□ -0.53
TUBB3-204ENST00000554116 HEMK1Q9Y5R4 338 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 USP9YO00507 2555 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-204ENST00000554116 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 C16orf96A6NNT2 1141 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 LMO7DNF2Z398 122 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 F8VZ95 297 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 FAM72CH0Y354 149 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 MUSKO15146 869 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 YY2O15391 372 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SRGAP2O75044 1071 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms